RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HMGN4O00479 90 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 SC5DO75845 299 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 ELNP15502 786 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 ABHD13Q7L211 337 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 AKR7LQ8NHP1 331 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 CASTOR1Q8WTX7 329 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 PNPLA2Q96AD5 504 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 RASL12Q9NYN1 266 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 OR6C65A6NJZ3 312 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 EEF1E1-BLOC1S5C9J1V9 151 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 ARG1P05089 322 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 MPGP29372 298 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 F2RL1P55085 397 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 CBFBQ13951 182 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 SCGB2B2Q4G0G5 96 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 MSANTD1Q6ZTZ1 278 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 RFKQ969G6 155 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 TRIM62Q9BVG3 475 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 TMEM38AQ9H6F2 299 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 CAPN10Q9HC96 672 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 ISYNA1Q9NPH2 558 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 ZNF337Q9Y3M9 751 aa13.34□□□□□ -0.27
CDT1-201ENST00000301019 A0A1W2PS29 197 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 F11P03951 625 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 CDK2P24941 298 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 TRHRP34981 398 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 SLC6A12P48065 614 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 PSEN2P49810 448 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 RHOUQ7L0Q8 258 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 FAM122BQ7Z309 247 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 GTPBP8Q8N3Z3 284 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 ZMYND19Q96E35 227 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 ZNF649Q9BS31 505 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 NDC1Q9BTX1 674 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 SLC12A9Q9BXP2 914 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 KLHL9Q9P2J3 617 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 MBD2Q9UBB5 411 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 IFNA4P05014 189 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 WFDC5Q8TCV5 224 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 C16orf58Q96GQ5 468 aa13.33□□□□□ -0.28
CDT1-201ENST00000301019 BARX1Q9HBU1 254 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 HMX1Q9NP08 348 aaPredicted RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 ZCCHC3Q9NUD5 404 aaKnown RBP13.33□□□□□ -0.28
CDT1-201ENST00000301019 IGLV3-10A0A075B6K4 115 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 A0A1B0GW55 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 A8MVJ9 347 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 M0QYG6 137 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 KLKB1P03952 638 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L2P0CJ85 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L3P0CJ86 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L4P0CJ87 422 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L5P0CJ88 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L6P0CJ89 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4L7P0CJ90 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 SMIM6P0DI80 62 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ABCD3P28288 659 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DLSTP36957 453 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 GPNMBQ14956 572 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 TEAD2Q15562 447 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 CSRP2Q16527 193 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ZNF280BQ86YH2 543 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ZNF383Q8NA42 475 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ZNF607Q96SK3 696 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 SDHAF3Q9NRP4 125 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 TAS2R5Q9NYW4 299 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DUX4Q9UBX2 424 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 GNG8Q9UK08 70 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 KCNK7Q9Y2U2 307 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 SURF4O15260 269 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 SOX15O60248 233 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 CD160O95971 181 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 PMP2P02689 132 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 GTF2F2P13984 249 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 NKPD1Q17RQ9 610 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 AADACL4Q5VUY2 407 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 MRM1Q6IN84 353 aaKnown RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 KCTD9Q7L273 389 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 FOXRED2Q8IWF2 684 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 APCDD1Q8J025 514 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 MORN4Q8NDC4 146 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 OR4E2Q8NGC2 313 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 UBTD2Q8WUN7 234 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 APOBEC4Q8WW27 367 aaKnown RBP13.32□□□□□ -0.28
CDT1-201ENST00000301019 NOX4Q9NPH5 578 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 MED9Q9NWA0 146 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ASB6Q9NWX5 421 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 DTX4Q9Y2E6 619 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 ANKRD36A6QL64 1941 aa13.32□□□□□ -0.28
CDT1-201ENST00000301019 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms