RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 HAGHLQ6PII5 290 aaPredicted RBP12.03□□□□□ -0.48
TVP23A-201ENST00000299866 WDR88Q6ZMY6 472 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 VN1R2Q8NFZ6 395 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 NSMAFQ92636 917 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 OTUB2Q96DC9 234 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 TRMT2BQ96GJ1 504 aaKnown RBP12.03□□□□□ -0.48
TVP23A-201ENST00000299866 KRCC1Q9NPI7 259 aaPredicted RBP12.03□□□□□ -0.48
TVP23A-201ENST00000299866 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 OR10H1Q9Y4A9 318 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 ATG4BQ9Y4P1 393 aa12.03□□□□□ -0.48
TVP23A-201ENST00000299866 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 MAN2B1O00754 1011 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 ATG12O94817 140 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 SRMP19623 302 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 SERTAD2Q14140 314 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 CSRP2Q16527 193 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 NDUFAF6Q330K2 333 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 MUC20Q8N307 709 aaPredicted RBP12.02□□□□□ -0.48
TVP23A-201ENST00000299866 OR4C6Q8NH72 309 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 ADAMTS15Q8TE58 950 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 COL26A1Q96A83 441 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 VN1R3Q9BXE9 311 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 PBX4Q9BYU1 374 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 CMC2Q9NRP2 79 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 FBXL3Q9UKT7 428 aa12.02□□□□□ -0.48
TVP23A-201ENST00000299866 A0A1B0GW55 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 MEIS3P1A6NDR6 274 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 IFITM5A6NNB3 132 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L2P0CJ85 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L3P0CJ86 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L4P0CJ87 422 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L5P0CJ88 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L6P0CJ89 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4L7P0CJ90 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TYRP1P17643 537 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 EPHB3P54753 998 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 MLC1Q15049 377 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 CDK5R1Q15078 307 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TSSK4Q6SA08 328 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 OVCH1Q7RTY7 1134 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 CBLN2Q8IUK8 224 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 LNX2Q8N448 690 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 C2CD4CQ8TF44 421 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 GFI1Q99684 422 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 SYNPO2LQ9H987 977 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 DUX4Q9UBX2 424 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 A0A1W2PR48 441 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 CTSLP07711 333 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TMIGD3P0DMS9 266 aaPredicted RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 SIRPAP78324 504 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 PRR5P85299 388 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF805Q5CZA5 627 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TMEM17Q86X19 198 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 OR56A1Q8NGH5 318 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TFGQ92734 400 aaPredicted RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 SLC35A4Q96G79 324 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 C6orf106Q9H6K1 298 aaPredicted RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 TMEM185BQ9H7F4 350 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 MRPL17Q9NRX2 175 aaKnown RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 ANKRD10Q9NXR5 420 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 USP36Q9P275 1121 aaKnown RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 FOXJ3Q9UPW0 622 aa12.02□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.49
TVP23A-201ENST00000299866 IDSB3KWA1 339 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 H3BSH0 61 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 PIN1P1O15428 100 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 RASGRP1O95267 797 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 ACADLP28330 430 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 GPR1P46091 355 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 PCGF3Q3KNV8 242 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 C4orf46Q504U0 113 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 OLFML2AQ68BL7 652 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 SLC16A11Q8NCK7 471 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 TCEAL4Q96EI5 215 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 CACYBPQ9HB71 228 aaKnown RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 CLDND1Q9NY35 253 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 PCYT1BQ9Y5K3 369 aaPredicted RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 KPNA3O00505 521 aaPredicted RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 ERI3O43414 337 aaKnown RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 LILRB5O75023 590 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 SNAPC5O75971 98 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 PVALBP20472 110 aaPredicted RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 DPP4P27487 766 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 CTGFP29279 349 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 TNFRSF17Q02223 184 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 SLC9A5Q14940 896 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 ZNF658BQ4V348 819 aaPredicted RBP12.01□□□□□ -0.49
TVP23A-201ENST00000299866 C9orf131Q5VYM1 1079 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 SLC6A19Q695T7 634 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 ZFP82Q8N141 532 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 OR4D10Q8NGI6 311 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 OR6K3Q8NGY3 331 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 TMEM239Q8WW34 195 aa12.01□□□□□ -0.49
TVP23A-201ENST00000299866 SLC25A32Q9H2D1 315 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms