RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CCR4P51679 360 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 SUCLG1P53597 346 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 SUMO3P55854 103 aaPredicted RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 CLDN18P56856 261 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 CLDN20P56880 219 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 SESN3P58005 492 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 SELENOWP63302 87 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 VLDLRP98155 873 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 MRPL49Q13405 166 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 CBFBQ13951 182 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 TRIM25Q14258 630 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 GANABQ14697 944 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 SLC10A1Q14973 349 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 CTU2Q2VPK5 515 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 DNAL1Q4LDG9 190 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 NHSL2Q5HYW2 709 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 INTS11Q5TA45 600 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 VASNQ6EMK4 673 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 LCN8Q6JVE9 175 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 VHLLQ6RSH7 139 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 PLXDC2Q6UX71 529 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 WDR88Q6ZMY6 472 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 CCDC121Q6ZUS5 278 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 PLEKHM3Q6ZWE6 761 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ATG4DQ86TL0 474 aaPredicted RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 GGNQ86UU5 652 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 CARM1Q86X55 608 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ADGRG3Q86Y34 549 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 KRT73Q86Y46 540 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ARHGAP24Q8N264 748 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 RPRMLQ8N4K4 120 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 FAM98AQ8NCA5 519 aaKnown RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 ST6GALNAC3Q8NDV1 305 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 OR52E4Q8NGH9 312 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 OR14L1PQ8NHC6 308 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 VANGL1Q8TAA9 524 aaPredicted RBP5.31□□□□□ -1.56
SSX3-201ENST00000298396 SLC35B4Q969S0 331 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 RELTQ969Z4 430 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 FAM162AQ96A26 154 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 C3orf49Q96BT1 292 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 WDYHV1Q96HA8 205 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ADGRG7Q96K78 797 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 RNF145Q96MT1 663 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 UGT2B28Q9BY64 529 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 AMBRA1Q9C0C7 1298 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 CTPS2Q9NRF8 586 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 SDHAF3Q9NRP4 125 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 MAN2C1Q9NTJ4 1040 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ACTR3BQ9P1U1 418 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 MAGEL2Q9UJ55 1249 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ZNF835Q9Y2P0 537 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 ZNF337Q9Y3M9 751 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 PKDREJQ9NTG1 2253 aa5.31□□□□□ -1.56
SSX3-201ENST00000298396 A0A087WZY1 265 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 TRGV5A0A0B4J1U4 118 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 A0A0B4J2E0 115 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 A0A0J9YW62 118 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 A0A1B0GX12 115 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 TMEM72A0PK05 275 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZC3H12DA2A288 527 aaKnown RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 CPSF4LA6NMK7 179 aaKnown RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 AQP7O14520 342 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 SUSD5O60279 629 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 HCN1O60741 890 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 TRAPPC6AO75865 159 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ATP5HO75947 161 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 PRKD3O94806 890 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 DIRAS1O95057 198 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF682O95780 498 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF708P17019 499 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF17P17021 662 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 PGCP20142 388 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 CHMP24386 653 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 SLC1A3P43003 542 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 SLC6A8P48029 635 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ERFP50548 548 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF41P51814 821 aaPredicted RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 CDH12P55289 794 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 RGS8P57771 180 aaPredicted RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 EGR4Q05215 589 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 TRAP1Q12931 704 aaKnown RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 BNIP2Q12982 314 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 CCNIQ14094 377 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 TOMM20Q15388 145 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 OR1Q1Q15612 314 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 GLYR1Q49A26 553 aaPredicted RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 ENTPD8Q5MY95 495 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 RAET1LQ5VY80 246 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 RTL6Q6ICC9 239 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 Q6ZPB1 254 aaPredicted RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 SEM1Q6ZVN7 128 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 NCCRP1Q6ZVX7 275 aaPredicted RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 YTHDF3Q7Z739 585 aaKnown RBP5.3□□□□□ -1.56
SSX3-201ENST00000298396 ADGRE4PQ86SQ3 457 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF605Q86T29 641 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ZNF440Q8IYI8 595 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ADGRG5Q8IZF4 528 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 GHDCQ8N2G8 530 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 MARVELD2Q8N4S9 558 aa5.3□□□□□ -1.56
SSX3-201ENST00000298396 ST8SIA1Q92185 356 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms