RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 MRTO4Q9UKD2 239 aaKnown RBP19.5■□□□□ 0.71
SOX17-201ENST00000297316 TRBV11-1A0A0K0K1C0 115 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 PCNX2A6NKB5 2137 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 PPP1R3DO95685 299 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 KLK3P07288 261 aaPredicted RBP19.5■□□□□ 0.71
SOX17-201ENST00000297316 CCKBRP32239 447 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 CRYBB2P43320 205 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 TUBA1BP68363 451 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 ZSWIM7Q19AV6 140 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 TMEM205Q6UW68 189 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 TUBA1AQ71U36 451 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 RFKQ969G6 155 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 NACC2Q96BF6 587 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 LPAR4Q99677 370 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 HMG20AQ9NP66 347 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 NDUFB11Q9NX14 153 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 LOXL2Q9Y4K0 774 aa19.5■□□□□ 0.71
SOX17-201ENST00000297316 EP300Q09472 2414 aaPredicted RBP19.49■□□□□ 0.71
SOX17-201ENST00000297316 A0A087WUJ7 227 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 PNMA8CA0A1B0GUJ8 204 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 TMEM200CA6NKL6 621 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 WNT4P56705 351 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 INSM1Q01101 510 aaPredicted RBP19.49■□□□□ 0.71
SOX17-201ENST00000297316 CBX3Q13185 183 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 NIPAL3Q6P499 406 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 ZBTB8BQ8NAP8 495 aaPredicted RBP19.49■□□□□ 0.71
SOX17-201ENST00000297316 SUMF1Q8NBK3 374 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 MCFD2Q8NI22 146 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 CDADC1Q9BWV3 514 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 KNTC1P50748 2209 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 OTOGLQ3ZCN5 2332 aa19.49■□□□□ 0.71
SOX17-201ENST00000297316 ZNF264O43296 627 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 HCN1O60741 890 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 MST1P26927 711 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 NOS3P29474 1203 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 ADH7P40394 386 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 SLC1A3P43003 542 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 ZNF117Q03924 483 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 C1DQ13901 141 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 TRIM16LQ309B1 348 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 ZNF485Q8NCK3 441 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 KBTBD8Q8NFY9 601 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 PTP4A1Q93096 173 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 NEURL2Q9BR09 285 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 EXOSC4Q9NPD3 245 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 CMC2Q9NRP2 79 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 EXOGQ9Y2C4 368 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 YARS2Q9Y2Z4 477 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 IGKV1D-42A0A075B6H8 117 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 TMEM129A0AVI4 362 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 ATP6V1G1O75348 118 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 LALBAP00709 142 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 UMODP07911 640 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 GXYLT1Q4G148 440 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 RPL13AP3Q6NVV1 102 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 KISS1RQ969F8 398 aaPredicted RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 DACH2Q96NX9 599 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 WDR12Q9GZL7 423 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 GPN3Q9UHW5 284 aaPredicted RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 DAPK2Q9UIK4 370 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 FBXL4Q9UKA2 621 aa19.48■□□□□ 0.71
SOX17-201ENST00000297316 EXOSC1Q9Y3B2 195 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 PTRH2Q9Y3E5 179 aaKnown RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 SPIN1Q9Y657 262 aaPredicted RBP19.48■□□□□ 0.71
SOX17-201ENST00000297316 IRGMA1A4Y4 181 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 C4orf47A7E2U8 309 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 SCO2O43819 266 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 KLF7O75840 302 aaPredicted RBP19.47■□□□□ 0.71
SOX17-201ENST00000297316 CLUP10909 449 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 SLC9A3P48764 834 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 SLC26A5P58743 744 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 COPZ1P61923 177 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 ZNF404Q494X3 552 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 OR51G2Q8NGK0 314 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 RACGAP1Q9H0H5 632 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 ICAM5Q9UMF0 924 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 WISP1O95388 367 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 FBXW4P57775 412 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 SNX29P2Q8IUI4 249 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 ZFP41Q8N8Y5 198 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 CYB561A3Q8NBI2 242 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 DEPDC7Q96QD5 511 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 FN3KQ9H479 309 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 PPIEQ9UNP9 301 aaKnown RBP19.47■□□□□ 0.71
SOX17-201ENST00000297316 NPFFR2Q9Y5X5 522 aa19.47■□□□□ 0.71
SOX17-201ENST00000297316 J3QRE1 110 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 HCRTR2O43614 444 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 IGHA1P01876 353 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 CELA2AP08217 269 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 CPEP16870 476 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 PNLIPRP2P54317 469 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 CRMP1Q14194 572 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 OXA1LQ15070 435 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 TOMM34Q15785 309 aaPredicted RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 TMEM44Q2T9K0 475 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 ZNF791Q3KP31 576 aaPredicted RBP19.46■□□□□ 0.71
SOX17-201ENST00000297316 TIMM50Q3ZCQ8 353 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 SLC37A3Q8NCC5 494 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 C17orf47Q8NEP4 570 aa19.46■□□□□ 0.71
SOX17-201ENST00000297316 DNAJA4Q8WW22 397 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms