RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 COQ7Q99807 217 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 TTYH2Q9BSA4 534 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 MROQ9BYG7 248 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 SLC25A18Q9H1K4 315 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 TRIM36Q9NQ86 728 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 IL20Q9NYY1 176 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 EXTL2Q9UBQ6 330 aa8.56□□□□□ -1.04
PRDM9-201ENST00000296682 TEX13CA0A0J9YWL9 993 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF670-ZNF695F2Z2N8 137 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 SRPX2O60687 465 aaPredicted RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ZGLP1P0C6A0 271 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 FOLR1P15328 257 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 CXCL12P48061 93 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 EEF1A1P68104 462 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 SCN1BQ07699 218 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PLCXD2Q0VAA5 305 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 Q8N402 240 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 MINDY2Q8NBR6 621 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PTP4A1Q93096 173 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 HLA-CQ95604 372 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 C8orf44Q96CB5 159 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ADAD1Q96M93 576 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ASB6Q9NWX5 421 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 NLKQ9UBE8 527 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 COPS7AQ9UBW8 275 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 MN1Q10571 1320 aaPredicted RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 TRBV2A0A0J9YWF9 115 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 OIP5O43482 229 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 SELENOFO60613 162 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 MT-ND5P03915 603 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 GUSBP08236 651 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 FNTBP49356 437 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ATP12AP54707 1039 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 RACK1P63244 317 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ZSWIM7Q19AV6 140 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PLET1Q6UQ28 207 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 RFLNBQ8N5W9 214 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 OR6N2Q8NGY6 317 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 MOSPD2Q8NHP6 518 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 DUSP19Q8WTR2 217 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PHF21AQ96BD5 680 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 G6PC3Q9BUM1 346 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 BABAM2Q9NXR7 383 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PRRC2CQ9Y520 2896 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 SERINC4A6NH21 518 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 H3BML4 177 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 TNFSF14O43557 240 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 FOSL2P15408 326 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 TBXA2RP21731 343 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 FBLP22087 321 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ARRB1P49407 418 aaPredicted RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 DMWDQ09019 674 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 P2RY14Q15391 338 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ULK3Q6PHR2 472 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF550Q7Z398 422 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 NANOGNBQ7Z5D8 188 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 AP3S1Q92572 193 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 GHSRQ92847 366 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 JSRP1Q96MG2 331 aaPredicted RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 PRSS27Q9BQR3 290 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 ENAMQ9NRM1 1142 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 MYEF2Q9P2K5 600 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 CTSFQ9UBX1 484 aa8.55□□□□□ -1.04
PRDM9-201ENST00000296682 LSM2Q9Y333 95 aaKnown RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 SIRT4Q9Y6E7 314 aaPredicted RBP8.55□□□□□ -1.04
PRDM9-201ENST00000296682 TMEM131Q92545 1883 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 CACNA1HO95180 2353 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 ACOD1A6NK06 481 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
PRDM9-201ENST00000296682 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
PRDM9-201ENST00000296682 IL7P13232 177 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 TACR3P29371 465 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 CD226Q15762 336 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 PLK5Q496M5 336 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 NXNL2Q5VZ03 156 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF322Q6U7Q0 402 aaPredicted RBP8.54□□□□□ -1.04
PRDM9-201ENST00000296682 NPSR1Q6W5P4 371 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 TMPRSS9Q7Z410 1059 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 OR6C4Q8NGE1 309 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 HOXB13Q92826 284 aaPredicted RBP8.54□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF304Q9HCX3 659 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 FANCMQ8IYD8 2048 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SVILO95425 2214 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 TRAV6A0A075B6T7 132 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 IRGMA1A4Y4 181 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 DUX1O43812 170 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 NDUFB2O95178 105 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 NGFRP08138 427 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SMIM10L1P0DMW3 83 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 C3orf38Q5JPI3 329 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 TUBA3EQ6PEY2 450 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SLC35D2Q76EJ3 337 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 RAB43Q86YS6 212 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 RDH10Q8IZV5 341 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 UXS1Q8NBZ7 420 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SMIM10Q96HG1 83 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms