RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TIMM29Q9BSF4 260 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 NOX3Q9HBY0 568 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 WSB2Q9NYS7 404 aaPredicted RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 H0YIV9 168 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 KLK8O60259 260 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 C1orf105O95561 183 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 C1QCP02747 245 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ALG10BQ5I7T1 473 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 TMEM185AQ8NFB2 350 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 NIPAL2Q9H841 368 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 HHATLQ9HCP6 504 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SCP2D1Q9UJQ7 156 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 WRBO00258 174 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 HRO43593 1189 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SPARCP09486 303 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ELK1P19419 428 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 OPCMLQ14982 345 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 PGGHGQ32M88 737 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 FAM27D1Q5T7N8 215 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SLX4IPQ5VYV7 408 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 CREB3L2Q70SY1 520 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 PNLDC1Q8NA58 520 aaKnown RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 ADAMTS18Q8TE60 1221 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 YBX2Q9Y2T7 364 aaKnown RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 DLEC1Q9Y238 1755 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SLC43A1O75387 559 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 AMY2AP04746 511 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 CFL1P23528 166 aaKnown RBP12.5□□□□□ -0.41
HPS3-201ENST00000296051 ZNF84P51523 738 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 HYAL1Q12794 435 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 LRFN4Q6PJG9 635 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 Q6ZS52 159 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 BHLHA9Q7RTU4 235 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 HS6ST2Q96MM7 605 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 ADOQ96SZ5 270 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 SEC22CQ9BRL7 303 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 PCDHB16Q9NRJ7 776 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 KLHL21Q9UJP4 597 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 PCNTO95613 3336 aa12.5□□□□□ -0.41
HPS3-201ENST00000296051 C1QBP02746 253 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 FAHD1Q6P587 224 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 LIX1LQ8IVB5 337 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 GPR137CQ8N3F9 429 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CNEP1R1Q8N9A8 125 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ZFAND1Q8TCF1 268 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ACOT11Q8WXI4 607 aaPredicted RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 GHSRQ92847 366 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ORAI3Q9BRQ5 295 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 PPA2Q9H2U2 334 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 PLCXD1Q9NUJ7 323 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ASF1BQ9NVP2 202 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 DIMT1Q9UNQ2 313 aaKnown RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 IER3IP1Q9Y5U9 82 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 USP54Q70EL1 1684 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 POM121BA6NF01 834 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 GPR89AB7ZAQ6 455 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 GPR89BP0CG08 455 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 AKR1C4P17516 323 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TRIM23P36406 574 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CCL11P51671 97 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 INSL4Q14641 139 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CDNFQ49AH0 187 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 METTL11BQ5VVY1 283 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CCDC190Q86UF4 302 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TMEM17Q86X19 198 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CDS1Q92903 461 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TMEM41AQ96HV5 264 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CDX2Q99626 313 aaPredicted RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 CUTCQ9NTM9 273 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TRAPPC13A5PLN9 417 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TVP23AA6NH52 213 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 HSPA12AO43301 675 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CR2P20023 1033 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 FABP5Q01469 135 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ASAH1Q13510 395 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 ZNF77Q15935 545 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 GGTA1PQ4G0N0 100 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 EEF1A1P5Q5VTE0 462 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
HPS3-201ENST00000296051 PKMYT1Q99640 499 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 CKAP5Q14008 2032 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 A0A0B4J203 849 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 hCG_1807616A0A1W2PRN6 198 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 PRAMEF2O60811 474 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 GDNFP39905 211 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 PRKXP51817 358 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 IHHQ14623 411 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 TCTN3Q6NUS6 607 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 SFXN4Q6P4A7 337 aa12.49□□□□□ -0.41
HPS3-201ENST00000296051 NLRP8Q86W28 1048 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms