RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ARL5BQ96KC2 179 aa24.08■■□□□ 1.45
SSU72-201ENST00000291386 MCHR1Q99705 422 aa24.08■■□□□ 1.45
SSU72-201ENST00000291386 SFXN3Q9BWM7 321 aa24.08■■□□□ 1.45
SSU72-201ENST00000291386 PRR14Q9BWN1 585 aa24.08■■□□□ 1.45
SSU72-201ENST00000291386 OR11A1Q9GZK7 315 aa24.08■■□□□ 1.45
SSU72-201ENST00000291386 ICE1Q9Y2F5 2266 aa24.08■■□□□ 1.44
SSU72-201ENST00000291386 CACNA1CQ13936 2221 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 A8MVM7 634 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 DVL2O14641 736 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 CCNA2P20248 432 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 MYBPHQ13203 477 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 GUSBP1Q15486 140 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 SWT1Q5T5J6 900 aaKnown RBP24.07■■□□□ 1.44
SSU72-201ENST00000291386 ZNF613Q6PF04 617 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 CBLL1Q75N03 491 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 MAMDC2Q7Z304 686 aaPredicted RBP24.07■■□□□ 1.44
SSU72-201ENST00000291386 ARHGAP24Q8N264 748 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 STK35Q8TDR2 534 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 RNF128Q8TEB7 428 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 LZICQ8WZA0 190 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 INTS12Q96CB8 462 aaKnown RBP24.07■■□□□ 1.44
SSU72-201ENST00000291386 PRRG4Q9BZD6 226 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 GLRX2Q9NS18 164 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 ADPRHL2Q9NX46 363 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 SH3GLB1Q9Y371 365 aa24.07■■□□□ 1.44
SSU72-201ENST00000291386 SULT2B1O00204 365 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 NPIPB7O75200 414 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 PNMTP11086 282 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 FOXF2Q12947 444 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 ALG10BQ5I7T1 473 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 GTF2IRD2BQ6EKJ0 949 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 GLYATQ6IB77 296 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 RINLQ6ZS11 566 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 GTF2IRD2Q86UP8 949 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 RBM45Q8IUH3 476 aaKnown RBP24.06■■□□□ 1.44
SSU72-201ENST00000291386 RNF148Q8N7C7 305 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 SLC38A4Q969I6 547 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 SLC47A1Q96FL8 570 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 GORASP2Q9H8Y8 452 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 PACSIN3Q9UKS6 424 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 MPDZO75970 2070 aa24.06■■□□□ 1.44
SSU72-201ENST00000291386 PTPN13Q12923 2485 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 ZC3H12DA2A288 527 aaKnown RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 TNFSF13O75888 250 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 UBOX5O94941 541 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 AGFG1P52594 562 aaKnown RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 ENTPD8Q5MY95 495 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 CARM1Q86X55 608 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 GCNT2Q8N0V5 402 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 SLC43A2Q8N370 569 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 VANGL1Q8TAA9 524 aaPredicted RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 GMPPAQ96IJ6 420 aaPredicted RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 POLR2J2Q9GZM3 115 aaKnown RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 POLR2J3Q9H1A7 115 aaKnown RBP24.05■■□□□ 1.44
SSU72-201ENST00000291386 GP6Q9HCN6 339 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 EGFL7Q9UHF1 273 aa24.05■■□□□ 1.44
SSU72-201ENST00000291386 A0A1W2PNV4 684 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 ELOA3DA6NLF2 546 aaPredicted RBP24.04■■□□□ 1.44
SSU72-201ENST00000291386 IMPDH2P12268 514 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 NCK1P16333 377 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 ENPP1P22413 925 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 BNIP2Q12982 314 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 CEACAM7Q14002 265 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 RNPS1Q15287 305 aaKnown RBP24.04■■□□□ 1.44
SSU72-201ENST00000291386 ELOA3BQ3SY89 546 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 C5orf46Q6UWT4 87 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 FCRLAQ7L513 359 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 RELL2Q8NC24 303 aaPredicted RBP24.04■■□□□ 1.44
SSU72-201ENST00000291386 ELOA3Q8NG57 546 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 ROBO4Q8WZ75 1007 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 FAM162AQ96A26 154 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 KCNJ16Q9NPI9 418 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 TAS2R1Q9NYW7 299 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 SELENONQ9NZV5 590 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 JKAMPQ9P055 326 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 MAGEL2Q9UJ55 1249 aa24.04■■□□□ 1.44
SSU72-201ENST00000291386 A0A087WUJ7 227 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 SMAD9O15198 467 aaKnown RBP24.03■■□□□ 1.44
SSU72-201ENST00000291386 SS18L1O75177 396 aaPredicted RBP24.03■■□□□ 1.44
SSU72-201ENST00000291386 GMNNO75496 209 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 SERPINA1P01009 418 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 BMP5P22003 454 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 IDUAP35475 653 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 KIR2DL2P43627 348 aaPredicted RBP24.03■■□□□ 1.44
SSU72-201ENST00000291386 EGR4Q05215 589 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 TFF3Q07654 80 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 PPP4R4Q6NUP7 873 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 LINC00114Q6XXX2 140 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 FAM156AQ8NDB6 213 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 ADAMTS16Q8TE57 1224 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 ZHX1-C8orf76Q96EF9 292 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 TPD52L3Q96J77 140 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 UCK2Q9BZX2 261 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 PIGMQ9H3S5 423 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 PLEKHB1Q9UF11 243 aaPredicted RBP24.03■■□□□ 1.44
SSU72-201ENST00000291386 RPS6KA6Q9UK32 745 aa24.03■■□□□ 1.44
SSU72-201ENST00000291386 HCFC1P51610 2035 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 A1L4Q6 167 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 FAM90A27PA6NNH2 459 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 CHP2O43745 196 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms