RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TRIM64A6NGJ6 449 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TRIM64BA6NI03 449 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR2AT4A6NND4 320 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 NOTOA8MTQ0 251 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 NPIPA2E9PIF3 369 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 NPIPA3F8WFD2 350 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HSPB6O14558 160 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 NDUFB2O95178 105 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 EML2O95834 649 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 WDPCPO95876 746 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 IL7P13232 177 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HLA-DMAP28067 261 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 MAGEB1P43366 347 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 LSSP48449 732 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 KCNJ5P48544 419 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 EMDP50402 254 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 WNT3P56703 355 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 FGFBP1Q14512 234 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 TCTN3Q6NUS6 607 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 C16orf47Q6ZP98 133 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 FCRLAQ7L513 359 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 DPY19L4Q7Z388 723 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 GALNT6Q8NCL4 622 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR5J2Q8NH18 312 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 HCAR2Q8TDS4 363 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 DNAJA4Q8WW22 397 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 AKAP1Q92667 903 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBR1-201ENST00000290650 DVL3Q92997 716 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 NEDD4LQ96PU5 975 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 THAP7Q9BT49 309 aaPredicted RBP4.44□□□□□ -1.7
UBR1-201ENST00000290650 FOLH1BQ9HBA9 442 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 OR2S2Q9NQN1 319 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 PADI2Q9Y2J8 665 aa4.44□□□□□ -1.7
UBR1-201ENST00000290650 CNOT1A5YKK6 2376 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 A0A1B0GWA3 101 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SHISA8B8ZZ34 492 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TLX3O43711 291 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 ACP2P11117 423 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PTGS2P35354 604 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 POU3F4P49335 361 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RACK1P63244 317 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLC35A2P78381 396 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 KIAA0040Q15053 153 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MEPCEQ7L2J0 689 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 TMEM99Q8N816 258 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RHOXF1Q8NHV9 184 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GHSRQ92847 366 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CNRIP1Q96F85 164 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 C7orf34Q96L11 122 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MRGPRX3Q96LB0 322 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TIMM29Q9BSF4 260 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLAMF7Q9NQ25 335 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MED11Q9P086 117 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 KLHL13Q9P2N7 655 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TMEFF2Q9UIK5 374 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 MGAT4AQ9UM21 535 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CCDC163A0A0D9SF12 145 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 IGHV3-64DA0A0J9YX35 117 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 A0A1B0GVI7 797 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 EEF1E1-BLOC1S5C9J1V9 151 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GOSR2O14653 212 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GPX5O75715 221 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CEACAM5P06731 702 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLC2A1P11166 492 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 LCN1P31025 176 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLC1A3P43003 542 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CAMK2DQ13557 499 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TATDN3Q17R31 274 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SYT14P1Q58G82 188 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CORO6Q6QEF8 472 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 LRRN1Q6UXK5 716 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 SLITRK4Q8IW52 837 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 BTBD2Q9BX70 525 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 OR10A5Q9H207 317 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ZNF346Q9UL40 294 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 LOC285556D6RIA3 1793 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 NUPL2O15504 423 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 P2RX6O15547 441 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 IGHV3-9P01782 118 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CSTBP04080 98 aaKnown RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 PKLRP30613 574 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 OPRD1P41143 372 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 POU4F3Q15319 338 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GLYR1Q49A26 553 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 YOD1Q5VVQ6 348 aaPredicted RBP4.43□□□□□ -1.7
UBR1-201ENST00000290650 PHC2Q8IXK0 858 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 IL17RCQ8NAC3 791 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 MINDY2Q8NBR6 621 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ACBD4Q8NC06 268 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 GPR119Q8TDV5 335 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 TSLPQ969D9 159 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 DHRS1Q96LJ7 313 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ST6GALNAC5Q9BVH7 336 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 C1QTNF2Q9BXJ5 285 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 CUTCQ9NTM9 273 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 RDH8Q9NYR8 311 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 PFDN2Q9UHV9 154 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 ZNF639Q9UID6 485 aa4.43□□□□□ -1.7
UBR1-201ENST00000290650 UGT2A1Q9Y4X1 527 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms