RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TMEM185BQ9H7F4 350 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 BCO1Q9HAY6 547 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ARMCX1Q9P291 453 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 USP22Q9UPT9 525 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 TRAPPC4Q9Y296 219 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 IFT52Q9Y366 437 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 CREBBPQ92793 2442 aa8.17□□□□□ -1.1
HMGN1-201ENST00000288344 ROS1P08922 2347 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 IGKV3D-15A0A087WSY6 115 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ZC3H12DA2A288 527 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CFAP73A6NFT4 308 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF716A6NP11 495 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ANGPT2O15123 496 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 SMAD9O15198 467 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CYTIPO60759 359 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 LGI1O95970 557 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 THY1P04216 161 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CD247P20963 164 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 EDNRAP25101 427 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 FKBP2P26885 142 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 HTR2AP28223 471 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 RYKP34925 604 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 KCNJ5P48544 419 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ASCL1P50553 236 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 RPS3AP61247 264 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 GNA13Q14344 377 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 LIN52Q52LA3 116 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 SYT14P1Q58G82 188 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 RABL3Q5HYI8 236 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 HBMQ6B0K9 141 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 REP15Q6BDI9 236 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 OR2A2Q6IF42 318 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 SNX32Q86XE0 403 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 MCEMP1Q8IX19 187 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 SLC15A3Q8IY34 581 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF440Q8IYI8 595 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF610Q8N9Z0 462 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 OR4D11Q8NGI4 311 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 OR10A6Q8NH74 314 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 RP9Q8TA86 221 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ROBO4Q8WZ75 1007 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 C3orf49Q96BT1 292 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 GMPPAQ96IJ6 420 aaPredicted RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 ELAC2Q9BQ52 826 aaKnown RBP8.16□□□□□ -1.1
HMGN1-201ENST00000288344 PSD2Q9BQI7 771 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 POTEKPQ9BYX7 375 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 PIGMQ9H3S5 423 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CHRNA9Q9UGM1 479 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CORO2BQ9UQ03 480 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 CCDC168Q8NDH2 2452 aa8.16□□□□□ -1.1
HMGN1-201ENST00000288344 IGKV1D-42A0A075B6H8 117 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 TMED7-TICAM2A0A0A6YYA0 188 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 TMEM72A0PK05 275 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 BBIP1A8MTZ0 92 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 FTCDNL1E5RQL4 147 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 M0QX08 132 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 FRS3O43559 492 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 RAMP1O60894 148 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 CYP7B1O75881 506 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 PMS2P2O95744 297 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 C8BP07358 591 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 TACR3P29371 465 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 CCKARP32238 428 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SFTPDP35247 375 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 HTR3AP46098 478 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 DIO1P49895 249 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SLC16A1P53985 500 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SORDQ00796 357 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 FAM27E3Q08E93 113 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 MERTKQ12866 999 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 MYBPHQ13203 477 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 NFYCQ13952 458 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SCARB2Q14108 478 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 VEZF1Q14119 521 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 LARS2Q15031 903 aaKnown RBP8.15□□□□□ -1.1
HMGN1-201ENST00000288344 PDK3Q15120 406 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 NPTX1Q15818 432 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 NRF1Q16656 503 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 VMACQ2NL98 169 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF311Q5JNZ3 666 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 FAM91A1Q658Y4 838 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 C3orf33Q6P1S2 294 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 HACD2Q6Y1H2 254 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 MEX3BQ6ZN04 569 aaKnown RBP8.15□□□□□ -1.1
HMGN1-201ENST00000288344 NUFIP2Q7Z417 695 aaKnown RBP8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SPATA21Q7Z572 469 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 HIPK4Q8NE63 616 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 ABHD3Q8WU67 409 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SLC25A43Q8WUT9 341 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-201ENST00000288344 SMPDL3BQ92485 455 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 CPNE4Q96A23 557 aaPredicted RBP8.15□□□□□ -1.1
HMGN1-201ENST00000288344 TAMM41Q96BW9 452 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 ARHGDIGQ99819 225 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 PTDSS2Q9BVG9 487 aa8.15□□□□□ -1.1
HMGN1-201ENST00000288344 OR11A1Q9GZK7 315 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms