RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 ZNF443Q9Y2A4 671 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-201ENST00000281187 RPS10-NUDT3A0A1W2PQS6 291 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 SLC22A23A1A5C7 686 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 PRAMEF27A3QJZ7 478 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 SGCEO43556 437 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 IGF2P01344 180 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 IFNGR1P15260 489 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 C21orf58P58505 322 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 FGL1Q08830 312 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 GPAT4Q86UL3 456 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 JAGN1Q8N5M9 183 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 OR51S1Q8NGJ8 323 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 CCDC107Q8WV48 283 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 HSD17B8Q92506 261 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 LMLNQ96KR4 655 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 FOXN4Q96NZ1 517 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 PELOQ9BRX2 385 aaKnown RBP13.18□□□□□ -0.3
VPS26B-201ENST00000281187 SGPP1Q9BX95 441 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 NKX6-2Q9C056 277 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-201ENST00000281187 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-201ENST00000281187 TMEM231Q9H6L2 316 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 C20orf141Q9NUB4 165 aa13.18□□□□□ -0.3
VPS26B-201ENST00000281187 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 TVP23AA6NH52 213 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 MCRIP1C9JLW8 97 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 NPIPB8E9PQR5 432 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 IFNA6P05013 189 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 EPCAMP16422 314 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SRMP19623 302 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 CDK2P24941 298 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SQSTM1Q13501 440 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ALG10BQ5I7T1 473 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ZNF227Q86WZ6 799 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ARIH2OSQ8N7S6 290 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 CLRN3Q8NCR9 226 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 NRIP3Q9NQ35 241 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 MED17Q9NVC6 651 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 GXYLT2A0PJZ3 443 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 FADS1O60427 444 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ADAMTS4O75173 837 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SOD2P04179 222 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SLC35G6P0C7Q6 338 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ITGA3P26006 1051 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ARFIP1P53367 373 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 DECR1Q16698 335 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 WDR89Q96FK6 387 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ZC3H10Q96K80 434 aaKnown RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SLC38A1Q9H2H9 487 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 IL20Q9NYY1 176 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 UPB1Q9UBR1 384 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ANKRD36A6QL64 1941 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 A0A1W2PR48 441 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 IDSB3KWA1 339 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 NMBP08949 121 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 MAKP20794 623 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 RPS27P42677 84 aaKnown RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 LIMK1P53667 647 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ACTA2P62736 377 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ACTG2P63267 376 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 CBFBQ13951 182 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SLC36A2Q495M3 483 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 SLC6A19Q695T7 634 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 VASNQ6EMK4 673 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 GALNTL5Q7Z4T8 443 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 IL17RCQ8NAC3 791 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ZNF578Q96N58 590 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 UQCC2Q9BRT2 126 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ENKD1Q9H0I2 346 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 MKKSQ9NPJ1 570 aaPredicted RBP13.17□□□□□ -0.3
VPS26B-201ENST00000281187 ICKQ9UPZ9 632 aa13.17□□□□□ -0.3
VPS26B-201ENST00000281187 DLSTP36957 453 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 GPNMBQ14956 572 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 ZNHIT3Q15649 155 aaPredicted RBP13.16□□□□□ -0.3
VPS26B-201ENST00000281187 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
VPS26B-201ENST00000281187 COMMD2Q86X83 199 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 GTPBP8Q8N3Z3 284 aaPredicted RBP13.16□□□□□ -0.3
VPS26B-201ENST00000281187 ZNF511Q8NB15 262 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 DTD2Q96FN9 168 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 ZDHHC5Q9C0B5 715 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 EVA1AQ9H8M9 152 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 ERVK-19Q9WJR5 959 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 CARNS1A5YM72 827 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 FAM74A7A6NL05 159 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 PEX12O00623 359 aa13.16□□□□□ -0.3
VPS26B-201ENST00000281187 SUSD5O60279 629 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms