RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 MARCH9Q86YJ5 346 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 TMCO5AQ8N6Q1 288 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 LRRC17Q8N6Y2 441 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 DNAJA4Q8WW22 397 aaPredicted RBP19.14■□□□□ 0.65
YBX3-202ENST00000279550 OIT3Q8WWZ8 545 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 RFKQ969G6 155 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 OTULINQ96BN8 352 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 SGTBQ96EQ0 304 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 COPS7AQ9UBW8 275 aa19.14■□□□□ 0.65
YBX3-202ENST00000279550 CDV3Q9UKY7 258 aaKnown RBP19.14■□□□□ 0.65
YBX3-202ENST00000279550 EXOGQ9Y2C4 368 aaKnown RBP19.14■□□□□ 0.65
YBX3-202ENST00000279550 FAM186AA6NE01 2351 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 J3QRK9 145 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 GTPBP1O00178 669 aaKnown RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 COPZ1P61923 177 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 ZNF362Q5T0B9 420 aaPredicted RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 TMEM205Q6UW68 189 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 SLC29A4Q7RTT9 530 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 ADAMTS14Q8WXS8 1223 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 OMA1Q96E52 524 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 B3GNT4Q9C0J1 378 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 EXOSC3Q9NQT5 275 aaKnown RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 CMC2Q9NRP2 79 aa19.13■□□□□ 0.65
YBX3-202ENST00000279550 MRTO4Q9UKD2 239 aaKnown RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 EXOSC1Q9Y3B2 195 aaKnown RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 PTRH2Q9Y3E5 179 aaKnown RBP19.13■□□□□ 0.65
YBX3-202ENST00000279550 ZNF264O43296 627 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 MYL12AP19105 171 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 ENDOUP21128 410 aaKnown RBP19.12■□□□□ 0.65
YBX3-202ENST00000279550 IL12BP29460 328 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 PLCXD2Q0VAA5 305 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 MLLT11Q13015 90 aaPredicted RBP19.12■□□□□ 0.65
YBX3-202ENST00000279550 USP43Q70EL4 1123 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 ATG4DQ86TL0 474 aaPredicted RBP19.12■□□□□ 0.65
YBX3-202ENST00000279550 OR2Y1Q8NGV0 311 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 VMP1Q96GC9 406 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 SH3YL1Q96HL8 342 aaPredicted RBP19.12■□□□□ 0.65
YBX3-202ENST00000279550 RACGAP1Q9H0H5 632 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 FN3KQ9H479 309 aa19.12■□□□□ 0.65
YBX3-202ENST00000279550 KNTC1P50748 2209 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 TMEM129A0AVI4 362 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 OR6C76A6NM76 312 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 UMODP07911 640 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 CD63P08962 238 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 ZNF117Q03924 483 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 ZNF829Q3KNS6 432 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 WBP2NLQ6ICG8 309 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 MARCH3Q86UD3 253 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 SIRT6Q8N6T7 355 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 NFAM1Q8NET5 270 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 OR6Q1Q8NGQ2 317 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 TM9SF4Q92544 642 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 NACC2Q96BF6 587 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 TRMT61AQ96FX7 289 aaKnown RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 ZNF649Q9BS31 505 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 AKIP1Q9NQ31 210 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 C19orf25Q9UFG5 118 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 CCDC182A6NF36 153 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 SAGE2PA6NJ88 616 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 ABCD3P28288 659 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 NOS3P29474 1203 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 SERPINB10P48595 397 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 WNT4P56705 351 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 GABREP78334 506 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 C1DQ13901 141 aaKnown RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 GXYLT1Q4G148 440 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 C16orf47Q6ZP98 133 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 CPEB2Q7Z5Q1 589 aaKnown RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 LHFPL3Q86UP9 236 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 IGFN1Q86VF2 1251 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 ESX1Q8N693 406 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 ZNF485Q8NCK3 441 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 KBTBD8Q8NFY9 601 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 PTP4A1Q93096 173 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 KISS1RQ969F8 398 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 BORCS5Q969J3 196 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 SH3GL3Q99963 347 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 LAT2Q9GZY6 243 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 NDUFB11Q9NX14 153 aa19.11■□□□□ 0.65
YBX3-202ENST00000279550 H2AFY2Q9P0M6 372 aaPredicted RBP19.11■□□□□ 0.65
YBX3-202ENST00000279550 METTL15A6NJ78 407 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 GMFGO60234 142 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 OR7A10O76100 309 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 IGHA1P01876 353 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 RAB40ALP0C0E4 278 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 TCN2P20062 427 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 LCN1P31025 176 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 SLC6A6P31641 620 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 IDUAP35475 653 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 SLC1A3P43003 542 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 CRYBB2P43320 205 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 SLC9A3P48764 834 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 TUBA1BP68363 451 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 ITGADQ13349 1161 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 LIPKQ5VXJ0 399 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 PAPD4Q6PIY7 484 aaKnown RBP19.1■□□□□ 0.65
YBX3-202ENST00000279550 TUBA1AQ71U36 451 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 MEPCEQ7L2J0 689 aaKnown RBP19.1■□□□□ 0.65
YBX3-202ENST00000279550 GID4Q8IVV7 300 aa19.1■□□□□ 0.65
YBX3-202ENST00000279550 PHC2Q8IXK0 858 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms