RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 EML6Q6ZMW3 1958 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 CFAP46Q8IYW2 2715 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 BSNQ9UPA5 3926 aa5.85□□□□□ -1.47
CD44-204ENST00000279452 SPENQ96T58 3664 aaKnown RBP5.85□□□□□ -1.47
CD44-204ENST00000279452 ZC3H12DA2A288 527 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 A8MVM7 634 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 B2RBV5 119 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 SYT5O00445 386 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 KPNA4O00629 521 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 SMAD9O15198 467 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 ZNF208O43345 1280 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 TPST2O60704 377 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 SS18L1O75177 396 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 GCM2O75603 506 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 PRKD3O94806 890 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 PMS2P2O95744 297 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 IL18BPO95998 194 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 SERPINA1P01009 418 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 GPIP06744 558 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 CRHP06850 196 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 PNMTP11086 282 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 KLK2P20151 261 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 FPR1P21462 350 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 CBLP22681 906 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 FKBP2P26885 142 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 AGTR1P30556 359 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 KDELR2P33947 212 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RPS5P46782 204 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 OR1E2P47887 323 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 GZMMP51124 257 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RAC3P60763 192 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 SLC35A1P78382 337 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RASGEF1BQ0VAM2 473 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 CEACAM7Q14002 265 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RNPS1Q15287 305 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 OR1Q1Q15612 314 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ENTPD8Q5MY95 495 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 OTUD3Q5T2D3 398 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 EEF1A1P5Q5VTE0 462 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 C1orf140Q5VVS0 124 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 AP1ARQ63HQ0 302 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ULK3Q6PHR2 472 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 TMPPEQ6ZT21 453 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 CCDC80Q76M96 950 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 FAM214BQ7L5A3 538 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ADGRE4PQ86SQ3 457 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ATG4DQ86TL0 474 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 GPAT4Q86UL3 456 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 STK32CQ86UX6 486 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RBM45Q8IUH3 476 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 P3H2Q8IVL5 708 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 TUSC5Q8IXB3 177 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 DEFB107AQ8IZN7 70 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 PGAM4Q8N0Y7 254 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 SLC43A2Q8N370 569 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 FAM156AQ8NDB6 213 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 GPR32P1Q8NGA4 272 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 OR6T1Q8NGN1 323 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 OR6K3Q8NGY3 331 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 PIGXQ8TBF5 258 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 RNF128Q8TEB7 428 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 DNAJA4Q8WW22 397 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 SLC35B4Q969S0 331 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ZNF775Q96BV0 537 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 SLC47A1Q96FL8 570 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 NSL1Q96IY1 281 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 ARHGDIGQ99819 225 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 GPATCH1Q9BRR8 931 aaKnown RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 NAA11Q9BSU3 229 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 KLHL4Q9C0H6 718 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 EVA1AQ9H8M9 152 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 NPDC1Q9NQX5 325 aaPredicted RBP5.84□□□□□ -1.47
CD44-204ENST00000279452 GLRX2Q9NS18 164 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 GALNT8Q9NY28 637 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 EMC3Q9P0I2 261 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 BOLA1Q9Y3E2 137 aa5.84□□□□□ -1.47
CD44-204ENST00000279452 HNRNPRO43390 633 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 EIF1BO60739 113 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 SERPINI2O75830 405 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 TNFSF13O75888 250 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 AKR7A3O95154 331 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 STAMBPO95630 424 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 LGI1O95970 557 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 IFNW1P05000 195 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 C8BP07358 591 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 YES1P07947 543 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 UMPSP11172 480 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 IMPDH2P12268 514 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 POU2F1P14859 743 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 NQO1P15559 274 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 CALB2P22676 271 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 IFNA8P32881 189 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 MSX2P35548 267 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 YAP1P46937 504 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 CLK1P49759 484 aaKnown RBP5.83□□□□□ -1.48
CD44-204ENST00000279452 MAP2K6P52564 334 aa5.83□□□□□ -1.48
CD44-204ENST00000279452 CDH12P55289 794 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms