RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 A6NL46 340 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 PRKCAP17252 672 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 SLC6A6P31641 620 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 RAG2P55895 527 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 POU6F2P78424 691 aaPredicted RBP11.89□□□□□ -0.51
C9orf3-201ENST00000277198 GALK2Q01415 458 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 NFATC4Q14934 902 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 CCNJQ5T5M9 372 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ARHGAP11AQ6P4F7 1023 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ARL9Q6T311 187 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 CEACAM19Q7Z692 300 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 SYS1Q8N2H4 156 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 SAMD12Q8N8I0 201 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 DEFB124Q8NES8 71 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 OR4M1Q8NGD0 313 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 PHYHIPQ92561 330 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 PGLYRP3Q96LB9 341 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ZFYVE21Q9BQ24 234 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 C7orf50Q9BRJ6 194 aaKnown RBP11.89□□□□□ -0.51
C9orf3-201ENST00000277198 HCAR1Q9BXC0 346 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 PCED1AQ9H1Q7 454 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ABCG5Q9H222 651 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ERVMER34-1Q9H9K5 563 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ADAP2Q9NPF8 381 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 SUSD2Q9UGT4 822 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 KCNE5Q9UJ90 142 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 SERTAD3Q9UJW9 196 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 RASD1Q9Y272 281 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 ENTPD2Q9Y5L3 495 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 CACNG2Q9Y698 323 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
C9orf3-201ENST00000277198 A0A0B4J2E0 115 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 A0A0G2JK05 382 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 A0A1B0GTQ1 180 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 A0A1B0GX12 115 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 TNFRSF10CO14798 259 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 CTSVO60911 334 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 UBL3O95164 117 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 EIF4EP06730 217 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 GKN3PP0CG01 181 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 AFF3P51826 1226 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 CLDN2P57739 230 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 RPS7P62081 194 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ACTA2P62736 377 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ACTG2P63267 376 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 PRICKLE4Q2TBC4 344 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 FCRL6Q6DN72 434 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 FIGLAQ6QHK4 219 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 THSD4Q6ZMP0 1018 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 UTS2BQ765I0 119 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR4N5Q8IXE1 308 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 LSMEM1Q8N8F7 131 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR7G1Q8NGA0 311 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 DEDD2Q8WXF8 326 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 SMPDL3BQ92485 455 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 TTC9Q92623 222 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 TRIM2Q9C040 744 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ENKD1Q9H0I2 346 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 MED20Q9H944 212 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 STMN3Q9NZ72 180 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 FAM221BA6H8Z2 402 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 A6NCN8 305 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 H0Y8X5 98 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 CYR61O00622 381 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 SLC31A1O15431 190 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OGG1O15527 345 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 P2RX6O15547 441 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 FZD7O75084 574 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 GATBO75879 557 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ARL6IP5O75915 188 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR2B3O76000 313 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 NKX2-2O95096 273 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 CD59P13987 128 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 UGT2B7P16662 529 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 RAB3BP20337 219 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 NT5EP21589 574 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 MMP15P51511 669 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ZNF85Q03923 595 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 MADCAM1Q13477 382 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 HLA-BQ31612 363 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ACSM3Q53FZ2 586 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ENPP7Q6UWV6 458 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 B3GLCTQ6Y288 498 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 GLCCI1Q86VQ1 547 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 POMGNT2Q8NAT1 580 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR13C2Q8NGS9 318 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 TRMT10AQ8TBZ6 339 aaKnown RBP11.88□□□□□ -0.51
C9orf3-201ENST00000277198 OR1E3Q8WZA6 343 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 SCMH1Q96GD3 660 aa11.88□□□□□ -0.51
C9orf3-201ENST00000277198 C4orf36Q96KX1 117 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms