RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 LALBAP00709 142 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 HIST1H1CP16403 213 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TACR3P29371 465 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 RPS19P39019 145 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 GRK6P43250 576 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 EGR4Q05215 589 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 ZFP36L1Q07352 338 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 DBPQ10586 325 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TRA2AQ13595 282 aaKnown RBP eCLIP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 IL11RAQ14626 422 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 PRR23CQ6ZRP0 262 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 OR52E2Q8NGJ4 325 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 OR5W2Q8NH69 310 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 FNDC8Q8TC99 324 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SPRYD4Q8WW59 207 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 UFD1Q92890 307 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 LRFN5Q96NI6 719 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 CTRCQ99895 268 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 SLC26A1Q9H2B4 701 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 AKIRIN1Q9H9L7 192 aaPredicted RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 NRIP3Q9NQ35 241 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 TXNL4BQ9NX01 149 aaKnown RBP8.75□□□□□ -1.01
TRIM55-201ENST00000276573 HAO2Q9NYQ3 351 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 NPFFR2Q9Y5X5 522 aa8.75□□□□□ -1.01
TRIM55-201ENST00000276573 DAPL1A0PJW8 107 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 D6RAR5 112 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF670-ZNF695F2Z2N8 137 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 PLD2O14939 933 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ARPC3O15145 178 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 IDH3BO43837 385 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 CLUP10909 449 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 PGCP20142 388 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ITPKBP27987 946 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 SOX6P35712 828 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 RPL4P36578 427 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 NRG3P56975 720 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 PRPS1P60891 318 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 RPS7P62081 194 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 RPS4XP62701 263 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 RPS25P62851 125 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 LTBQ06643 244 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 GALEQ14376 348 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF74Q16587 644 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ISXQ2M1V0 245 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF791Q3KP31 576 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ZNF322Q6U7Q0 402 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM205Q6UW68 189 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 TMPRSS11AQ6ZMR5 421 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 C16orf47Q6ZP98 133 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 NUP54Q7Z3B4 507 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 CPEB2Q7Z5Q1 589 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 BTLAQ7Z6A9 289 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 FAM98AQ8NCA5 519 aaKnown RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 ZBTB44Q8NCP5 570 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 OR4K13Q8NH42 304 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 TMEM203Q969S6 136 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 C1GALT1C1Q96EU7 318 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 DEPDC7Q96QD5 511 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 DDOQ99489 341 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 SPSB2Q99619 263 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 TIMP4Q99727 224 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 WDR77Q9BQA1 342 aaPredicted RBP8.74□□□□□ -1.01
TRIM55-201ENST00000276573 FBXL4Q9UKA2 621 aa8.74□□□□□ -1.01
TRIM55-201ENST00000276573 PNMA8CA0A1B0GUJ8 204 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 C17orf51A8MQB3 221 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 BLOC1S5-TXNDC5H3BN57 136 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ADAM10O14672 748 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SLC30A4O14863 429 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 KHNYNO15037 678 aaKnown RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SBK2P0C263 348 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GP1BBP13224 206 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CXCR1P25024 350 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 EVI2BP34910 448 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SLC16A1P53985 500 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 EFR3AQ14156 821 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 TOMM34Q15785 309 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LPAL2Q16609 132 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GXYLT1Q4G148 440 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CRTC2Q53ET0 693 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 MRPL14Q6P1L8 145 aaKnown RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 Q6ZNX1 250 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 C10orf53Q8N6V4 93 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 BMPERQ8N8U9 685 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ZFP41Q8N8Y5 198 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LRRC75AQ8NAA5 344 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 NPEPL1Q8NDH3 523 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 AGBL5Q8NDL9 886 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 MOSPD2Q8NHP6 518 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 NUBPLQ8TB37 319 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 DUSP19Q8WTR2 217 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ATOH1Q92858 354 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 MOGAT1Q96PD6 335 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 GPX7Q96SL4 187 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 LPAR4Q99677 370 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 CRB3Q9BUF7 120 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 C6orf62Q9GZU0 229 aaPredicted RBP8.73□□□□□ -1.01
TRIM55-201ENST00000276573 SMOC1Q9H4F8 434 aa8.73□□□□□ -1.01
TRIM55-201ENST00000276573 ISG20L2Q9H9L3 353 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms