RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF311Q5JNZ3 666 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 METTL11BQ5VVY1 283 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM220Q6QAJ8 160 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ARSKQ6UWY0 536 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MBOAT2Q6ZWT7 520 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MEPCEQ7L2J0 689 aaKnown RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 NLRC3Q7RTR2 1065 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 LILRA3Q8N6C8 439 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OR56A1Q8NGH5 318 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OR10Z1Q8NGY1 313 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OR4C6Q8NH72 309 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SLC2A12Q8TD20 617 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 LMX1AQ8TE12 382 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SMIM4Q8WVI0 70 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 GIMAP1Q8WWP7 306 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF514Q96K75 400 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PELOQ9BRX2 385 aaKnown RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PCBD2Q9H0N5 130 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 KRCC1Q9NPI7 259 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 NLGN3Q9NZ94 848 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 GPR52Q9Y2T5 361 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PLSCR5A0PG75 271 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SLC9B1P1A6NJY1 282 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TNFRSF10CO14798 259 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ECDO95905 644 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MT-ND5P03915 603 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 IL5P05113 134 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 CEACAM5P06731 702 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 KELP23276 732 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 GIFP27352 417 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SHC1P29353 583 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PRKAR1BP31321 381 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 C1orf61Q13536 156 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OPCMLQ14982 345 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TCEA2Q15560 299 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PRRT3Q5FWE3 981 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 RGS7BPQ6MZT1 257 aaPredicted RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 NIPAL3Q6P499 406 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 SHFQ7M4L6 423 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 RD3Q7Z3Z2 195 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OR6V1Q8N148 313 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 OR2T33Q8NG76 320 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PHYHIPQ92561 330 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 COX14Q96I36 57 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 AMDHD1Q96NU7 426 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 AIF1LQ9BQI0 150 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ALG8Q9BVK2 526 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 LDAHQ9H6V9 325 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 ACSL5Q9ULC5 683 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM5Q9Y2B1 443 aa9.53□□□□□ -0.88
UPF3B-201ENST00000276201 MDC1Q14676 2089 aaKnown RBP9.53□□□□□ -0.88
UPF3B-201ENST00000276201 PRSS38A1L453 326 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 TNFSF14O43557 240 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 OR2A4O95047 310 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 LDOC1O95751 146 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 CFDP00746 253 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 SERPINA3P01011 423 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 FTH1P19P0C7X4 201 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 BLKP51451 505 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 RAP2BP61225 183 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 HSPB3Q12988 150 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 CXXC5Q7LFL8 322 aaKnown RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 HSD17B13Q7Z5P4 300 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 SIRT6Q8N6T7 355 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF527Q8NB42 609 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 OR5W2Q8NH69 310 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 ABHD4Q8TB40 342 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 XAGE5Q8WWM1 108 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 PTP4A1Q93096 173 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 OR2A7Q96R45 310 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 GLIPR2Q9H4G4 154 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 PRM3Q9NNZ6 103 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 LHX9Q9NQ69 397 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 HINT3Q9NQE9 182 aaKnown RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 SDHAF2Q9NX18 166 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 RDH8Q9NYR8 311 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 RPS6KB2Q9UBS0 482 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 SLC17A4Q9Y2C5 497 aa9.52□□□□□ -0.88
UPF3B-201ENST00000276201 SIRT4Q9Y6E7 314 aaPredicted RBP9.52□□□□□ -0.88
UPF3B-201ENST00000276201 A0A0A6YYD5 115 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 A0A1W2PRG6 482 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 TRABD2BA6NFA1 517 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 LMO7DNF2Z398 122 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 SULT1B1O43704 296 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 STX11O75558 287 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 ADRB1P08588 477 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 ATF4P18848 351 aaPredicted RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 NUP62P37198 522 aaPredicted RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 CD96P40200 585 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 MNDAP41218 407 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 BLVRAP53004 296 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 NRG3P56975 720 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 ZNF273Q14593 569 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 DEFB133Q30KQ1 61 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 OLFML2AQ68BL7 652 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 DMKNQ6E0U4 476 aaPredicted RBP9.52□□□□□ -0.89
UPF3B-201ENST00000276201 RPL13AP3Q6NVV1 102 aa9.52□□□□□ -0.89
UPF3B-201ENST00000276201 FAM198BQ6UWH4 519 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms