RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 HACD4Q5VWC8 232 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 SHEQ5VZ18 495 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 LCN10Q6JVE6 187 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 ARHGAP11AQ6P4F7 1023 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 MSRB3Q8IXL7 192 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 DCUN1D4Q92564 292 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 MIOXQ9UGB7 285 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 DHDHQ9UQ10 334 aa11.27□□□□□ -0.6
ERBB2-201ENST00000269571 A0A0B4J203 849 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 NAP1L6A6NFF2 107 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 HRO43593 1189 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 VEGFDO43915 354 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 FURINP09958 794 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 S1PR1P21453 382 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 HOXC13P31276 330 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 UBE2MP61081 183 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 POLR2GP62487 172 aaKnown RBP eCLIP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 DSC1Q08554 894 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 L3MBTL4Q8NA19 623 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 OR5AK2Q8NH90 309 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SETD7Q8WTS6 366 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 PIGMQ9H3S5 423 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 MTHFD2LQ9H903 347 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SLC6A5Q9Y345 797 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 ALPK2Q86TB3 2170 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 AHSA1O95433 338 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 TXNDC12O95881 172 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 CFIP05156 583 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 RBMXP38159 391 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 RASGEF1BQ0VAM2 473 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SLC29A4Q7RTT9 530 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SLC9B2Q86UD5 537 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 LINC01465Q8N7H1 131 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SMAP2Q8WU79 429 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 TMEM43Q9BTV4 400 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 C8orf33Q9H7E9 229 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 ZFP57Q9NU63 452 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 PLCXD1Q9NUJ7 323 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 WSB2Q9NYS7 404 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 KLRF1Q9NZS2 232 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 FLVCR2Q9UPI3 526 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 CA3P07451 260 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 PCMT1P22061 227 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 FABP5Q01469 135 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 FAM27D1Q5T7N8 215 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 MEPCEQ7L2J0 689 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 RASGEF1AQ8N9B8 481 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 AVL9Q8NBF6 648 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 CDS1Q92903 461 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 SLC22A12Q96S37 553 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 CDCA4Q9BXL8 241 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 MS4A7Q9GZW8 240 aaPredicted RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 RNF32Q9H0A6 362 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 HHATLQ9HCP6 504 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 MRPS17Q9Y2R5 130 aaKnown RBP11.27□□□□□ -0.61
ERBB2-201ENST00000269571 V9GY05 133 aa11.27□□□□□ -0.61
ERBB2-201ENST00000269571 UPK1AO00322 258 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 DSCR3O14972 297 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 MAGEB4O15481 346 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 CRTAPO75718 401 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 PRSS23O95084 383 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 RAB28P51157 221 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 CTXN1P60606 82 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 RPS21P63220 83 aaKnown RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 DGCR2P98153 550 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TDGQ13569 410 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 SLC35F2Q8IXU6 374 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TERB2Q8NHR7 220 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 LINC01599Q8WXQ3 324 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 CLSTN3Q9BQT9 956 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ZNF701Q9NV72 531 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 KLF8O95600 359 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TIMP1P01033 207 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ANXA7P20073 488 aaKnown RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 HSD11B1P28845 292 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TSPAN31Q12999 210 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 C9orf152Q5JTZ5 239 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 FAAP20Q6NZ36 180 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ACTRT3Q9BYD9 372 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ZMAT3Q9HA38 289 aaKnown RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ZNF629Q9UEG4 869 aaPredicted RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 ECM29Q5VYK3 1845 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 TSPAN12O95859 305 aa11.26□□□□□ -0.61
ERBB2-201ENST00000269571 RBMS1P29558 406 aaKnown RBP11.26□□□□□ -0.61
ERBB2-201ENST00000269571 XCR1P46094 333 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms