RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 EMP2P54851 167 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 ZFP36L1Q07352 338 aaKnown RBP15.17■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF74Q16587 644 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 LPAL2Q16609 132 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 CYB561A3Q8NBI2 242 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 LRFN5Q96NI6 719 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 ERMAPQ96PL5 475 aaPredicted RBP15.17■□□□□ 0.02
CCDC40-201ENST00000269318 CTRCQ99895 268 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 TBL1XR1Q9BZK7 514 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 WDR12Q9GZL7 423 aaKnown RBP15.17■□□□□ 0.02
CCDC40-201ENST00000269318 MEN1O00255 615 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 IFNGP01579 166 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 CLUP10909 449 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 PAICSP22234 425 aaKnown RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TACR3P29371 465 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 EVI2BP34910 448 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ACSM1Q08AH1 577 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TRA2AQ13595 282 aaKnown RBP eCLIP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 KLHL12Q53G59 568 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 MRPL14Q6P1L8 145 aaKnown RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 DPY19L2P2Q6ZN68 376 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 BTLAQ7Z6A9 289 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 IGFN1Q86VF2 1251 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 KLHL36Q8N4N3 616 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF563Q8TA94 476 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 METTL21AQ8WXB1 218 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 GPX7Q96SL4 187 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TIMP4Q99727 224 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 SMOC1Q9H4F8 434 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 EXOSC4Q9NPD3 245 aaKnown RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 FBXL4Q9UKA2 621 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF354AO60765 605 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 HIST1H1CP16403 213 aaKnown RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF791Q3KP31 576 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 GXYLT1Q4G148 440 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 PAPD4Q6PIY7 484 aaKnown RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TMEM205Q6UW68 189 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 C16orf47Q6ZP98 133 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ACBD7Q8N6N7 88 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 NUBPLQ8TB37 319 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 UFD1Q92890 307 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 OR51V1Q9H2C8 321 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 AKIRIN1Q9H9L7 192 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-201ENST00000269318 MMP25Q9NPA2 562 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 NRIP3Q9NQ35 241 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 HAO2Q9NYQ3 351 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 B3GNT3Q9Y2A9 372 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 ADAM18Q9Y3Q7 739 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 IER3IP1Q9Y5U9 82 aa15.16■□□□□ 0.02
CCDC40-201ENST00000269318 TMEM200CA6NKL6 621 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 C12orf71A8MTZ7 269 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF670-ZNF695F2Z2N8 137 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ARPC3O15145 178 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 CPNE3O75131 537 aaKnown RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 LTBQ06643 244 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 TOMM34Q15785 309 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ISXQ2M1V0 245 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF528Q3MIS6 628 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF322Q6U7Q0 402 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 NUP54Q7Z3B4 507 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 CPEB2Q7Z5Q1 589 aaKnown RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 TMEM99Q8N816 258 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 OR52E2Q8NGJ4 325 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 OR5W2Q8NH69 310 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 FNDC8Q8TC99 324 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 SPRYD4Q8WW59 207 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 MOGAT1Q96PD6 335 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ASPNQ9BXN1 380 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ADGRL4Q9HBW9 690 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 SSR3Q9UNL2 185 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 HIF3AQ9Y2N7 669 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 YARS2Q9Y2Z4 477 aaKnown RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 NPFFR2Q9Y5X5 522 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 LRRTM2O43300 516 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 SP9P0CG40 484 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF28P17035 718 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 NRG3P56975 720 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 PRPS1P60891 318 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 RPS25P62851 125 aaKnown RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 C16orf87Q6PH81 154 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 AGBL5Q8NDL9 886 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 OR4K13Q8NH42 304 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 MOSPD2Q8NHP6 518 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 DDOQ99489 341 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 LPAR4Q99677 370 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 CRB3Q9BUF7 120 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 SIAEQ9HAT2 523 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 TXNL4BQ9NX01 149 aaKnown RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 KLHL21Q9UJP4 597 aa15.15■□□□□ 0.02
CCDC40-201ENST00000269318 CAB39Q9Y376 341 aaPredicted RBP15.15■□□□□ 0.02
CCDC40-201ENST00000269318 PLD2O14939 933 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 SCO2O43819 266 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 CYC1P08574 325 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 SBK2P0C263 348 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 ASAH2BP0C7U1 165 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 GABRA5P31644 462 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 RPL4P36578 427 aaKnown RBP15.14■□□□□ 0.01
CCDC40-201ENST00000269318 GRK6P43250 576 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 RPS7P62081 194 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms