RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 OR52A4PA6NMU1 304 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 KIR2DS3K7RE56 304 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 SOCS6O14544 535 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 MBTPS2O43462 519 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 THEGLP0DJG4 465 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 GABRB1P18505 474 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 FRKP42685 505 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 PGDP52209 483 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ACTBP60709 375 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ACTG1P63261 375 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ARFRP1Q13795 201 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 KIR2DS5Q14953 304 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF385BQ569K4 471 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 PRRT3Q5FWE3 981 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 FAM71E1Q6IPT2 247 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 FIGNL1Q6PIW4 674 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM205Q6UW68 189 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 SYNPRQ8TBG9 265 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 GHSRQ92847 366 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF285Q96NJ3 590 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 MED18Q9BUE0 208 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 RPP25Q9BUL9 199 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 SPNS1Q9H2V7 528 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 EMC3Q9P0I2 261 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 MRTO4Q9UKD2 239 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF860A6NHJ4 632 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 DPM1O60762 260 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 FARS2O95363 451 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 AMY2AP04746 511 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 DBIP07108 87 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 HTR1FP30939 366 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 S100A11P31949 105 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 GABRA3P34903 492 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 TRIM23P36406 574 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 CRYBB2P43320 205 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 MAPK14Q16539 360 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 Q6ZSR6 202 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 PLA2G15Q8NCC3 412 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 RELTQ969Z4 430 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 TOE1Q96GM8 510 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 C5orf34Q96MH7 638 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 SLAMF7Q9NQ25 335 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 WASH6PQ9NQA3 447 aa10.71□□□□□ -0.69
CLSTN3-201ENST00000266546 GMDSO60547 372 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 SDC3O75056 442 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 GIMD1P0DJR0 217 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 CD34P28906 385 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 PSMB10P40306 273 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 S100A10P60903 97 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 HYAL2Q12891 473 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 FXNQ16595 210 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 ABHD13Q7L211 337 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 FCRLAQ7L513 359 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 ZER1Q7Z7L7 766 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 OR2L8Q8NGY9 312 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 RNASE11Q8TAA1 199 aaKnown RBP10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 MRI1Q9BV20 369 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 TMEM168Q9H0V1 697 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 FN3KQ9H479 309 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 SRA1Q9HD15 236 aaKnown RBP10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 RXFP3Q9NSD7 469 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 ACTR10Q9NZ32 417 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 V9GY05 133 aa10.71□□□□□ -0.7
CLSTN3-201ENST00000266546 ARRDC5A6NEK1 342 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 HOXC4P09017 264 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 RPS15AP62244 130 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 KIR2DS3Q14952 304 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 BTN2A1Q7KYR7 527 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 OLIG3Q7RTU3 272 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF546Q86UE3 836 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 OR4N5Q8IXE1 308 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 ZBTB44Q8NCP5 570 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 MRGPRX1Q96LB2 322 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 ARPC5LQ9BPX5 153 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 C20orf85Q9H1P6 137 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 SLC52A3Q9NQ40 469 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 CAMK2AQ9UQM7 478 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 EEF1E1-BLOC1S5C9J1V9 151 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 K7ESM1 405 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 LGI1O95970 557 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 UGT2B7P16662 529 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 DEFB134Q4QY38 66 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 WDR53Q7Z5U6 358 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 KCTD20Q7Z5Y7 419 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 C10orf111Q8N326 155 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 OR9A2Q8NGT5 310 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 LGALS14Q8TCE9 139 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 BPIFA2Q96DR5 249 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 PELOQ9BRX2 385 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 PRR14Q9BWN1 585 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 ISYNA1Q9NPH2 558 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 GSKIPQ9P0R6 139 aa10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 USP36Q9P275 1121 aaKnown RBP10.7□□□□□ -0.7
CLSTN3-201ENST00000266546 GRHPRQ9UBQ7 328 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms