RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 AVPR2P30518 371 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 MAGEB1P43366 347 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 HTR5AP47898 357 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ART1P52961 327 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CLDN12P56749 244 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CACNG1Q06432 222 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CMTM8Q8IZV2 173 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 OR4K5Q8NGD3 323 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 OR51G2Q8NGK0 314 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 LGALS14Q8TCE9 139 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ARMC5Q96C12 935 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TMEM41AQ96HV5 264 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SMOC1Q9H4F8 434 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TREM2Q9NZC2 230 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 hCG_1809904A0A1W2PP81 198 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 A0A1W2PR64 198 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 A0A1W2PRV1 198 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CCDC85CA6NKD9 419 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 C1orf196B1AJZ1 125 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 F5H5P2 479 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SYT5O00445 386 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 GAPDHSO14556 408 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 OIP5O43482 229 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PAK4O96013 591 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 ANXA4P09525 319 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 HPGDP15428 266 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ABOP16442 354 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 HMGA1P17096 107 aaKnown RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 ZNF8P17098 575 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRPH2P23942 346 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TRHRP34981 398 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 PTGER3P43115 390 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ASMTP46597 345 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 POU4F2Q12837 409 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 DYRK1AQ13627 763 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PEA15Q15121 130 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 LRRC37A5PQ49AS3 106 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRRT3Q5FWE3 981 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 C9orf50Q5SZB4 431 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLC8B1Q6J4K2 584 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 UNQ6126/PRO20091Q6UXV3 157 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLC36A4Q6YBV0 504 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 FAM122BQ7Z309 247 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 GRASPQ7Z6J2 395 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 SERPINA9Q86WD7 417 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 OR4Q3Q8NH05 313 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLAMF9Q96A28 289 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 NEU1Q99519 415 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 FN3KQ9H479 309 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLC32A1Q9H598 525 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ASB6Q9NWX5 421 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 FBXL3Q9UKT7 428 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 AK6Q9Y3D8 172 aaKnown RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 ZNF337Q9Y3M9 751 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 A6NLC8 198 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRRT4C9JH25 899 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 C9JQL5 133 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 NEDD8-MDP1E9PL57 170 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 HOXC4P09017 264 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 DAOP14920 347 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 RHOQP17081 205 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SDHAP31040 664 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SOAT1P35610 550 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 RPIAP49247 311 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TAS2R60P59551 318 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CHAF1BQ13112 559 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CHIT1Q13231 466 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 HYAL4Q2M3T9 481 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TMEM95Q3KNT9 176 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CCDC157Q569K6 752 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLC25A30Q5SVS4 291 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SLC36A1Q7Z2H8 476 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PPP1R3BQ86XI6 285 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 VRK3Q8IV63 474 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 POGLUT1Q8NBL1 392 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 OR52N2Q8NGI0 321 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 OR5D16Q8NGK9 328 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 WFDC5Q8TCV5 224 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 CSGALNACT1Q8TDX6 532 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PAQR8Q8TEZ7 354 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ACOT11Q8WXI4 607 aaPredicted RBP8.11□□□□□ -1.11
VAPB-201ENST00000265619 CRISPLD2Q9H0B8 497 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 PRO1933Q9H354 126 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 IL23AQ9NPF7 189 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 TMEM248Q9NWD8 314 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 ANKRD10Q9NXR5 420 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 SH3BGRL2Q9UJC5 107 aa8.11□□□□□ -1.11
VAPB-201ENST00000265619 FAAHO00519 579 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 GRM6O15303 877 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 LATS1O95835 1130 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ADH1AP07327 375 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ZDHHC11BP0C7U3 371 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 ITGA3P26006 1051 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 OR7A5Q15622 319 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RNF212Q495C1 297 aa8.1□□□□□ -1.11
VAPB-201ENST00000265619 RAB12Q6IQ22 244 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms