RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 LSSP48449 732 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 NKPD1Q17RQ9 610 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 C14orf28Q4W4Y0 310 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 C9orf50Q5SZB4 431 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 DESI1Q6ICB0 168 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 C3orf33Q6P1S2 294 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 OR13F1Q8NGS4 319 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ZFPM2Q8WW38 1151 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ZNF486Q96H40 463 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 THAP7Q9BT49 309 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 MMP28Q9H239 520 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 OR2S2Q9NQN1 319 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 TAS2R16Q9NYV7 291 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 A6NIN4 97 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ZNF806P0C7X5 589 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 AIMP2Q13155 320 aaKnown RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 GNMTQ14749 295 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 P2RY14Q15391 338 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 FAM76BQ5HYJ3 339 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 MICAL3Q7RTP6 2002 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 A0A1B0GTL3 188 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 COL28A1Q2UY09 1125 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 TMEM176BQ3YBM2 270 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 CCSAPQ6IQ19 270 aaPredicted RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
CDH3-201ENST00000264012 Q6ZNX1 250 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 KCTD20Q7Z5Y7 419 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 SLC35F3Q8IY50 421 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 COQ8AQ8NI60 647 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 ADAMTS14Q8WXS8 1223 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 MRGPRX1Q96LB2 322 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 AIFM2Q9BRQ8 373 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 GAREM1Q9H706 876 aa12.99□□□□□ -0.33
CDH3-201ENST00000264012 EEF1E1-BLOC1S5C9J1V9 151 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 H3BUI4 141 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 CD79AP11912 226 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 FPR3P25089 353 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 POLR2HP52434 150 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 OR1D5P58170 312 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 PPP2CBP62714 309 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 PPP2CAP67775 309 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 CRMP1Q14194 572 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 TSC22D1Q15714 1073 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 CCDC58Q4VC31 144 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 LIX1LQ8IVB5 337 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 OR51T1Q8NGJ9 327 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 RHOXF1Q8NHV9 184 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 SYNPRQ8TBG9 265 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 KCNN3Q9UGI6 736 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 COL4A1P02462 1669 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 GPRIN2O60269 458 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 RAB3DO95716 219 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 OR8G3PP0DMU2 310 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 TRMT12Q53H54 448 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 CSNK2A3Q8NEV1 391 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 OR5D14Q8NGL3 314 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ANKRD19PQ9H560 264 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 CACNG2Q9Y698 323 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 H7C1C5 153 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ARSBP15848 533 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 TRHRP34981 398 aaPredicted RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 ALDH3B2P48448 385 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 NKX2-5P52952 324 aaPredicted RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 LCN6P62502 163 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ADARB1P78563 741 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 SF3A2Q15428 464 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 DUSP5Q16690 384 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ZNF385BQ569K4 471 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 RBM45Q8IUH3 476 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 BOLLQ8N9W6 283 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 RADILQ96JH8 1075 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 C7orf34Q96L11 122 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ENY2Q9NPA8 101 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 ABCA3Q99758 1704 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 METTL15A6NJ78 407 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 BMP4P12644 408 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 GABRA5P31644 462 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 TRIM61Q5EBN2 209 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 SAXO2Q658L1 398 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 MRPL21Q7Z2W9 205 aaKnown RBP12.98□□□□□ -0.33
CDH3-201ENST00000264012 ASB17Q8WXJ9 295 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
CDH3-201ENST00000264012 A0A1W2PQ09 198 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 CD34P28906 385 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 FASLGP48023 281 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 HSD17B7P56937 341 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 DCAF12Q5T6F0 453 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 SLX4IPQ5VYV7 408 aa12.97□□□□□ -0.33
CDH3-201ENST00000264012 MISPQ8IVT2 679 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms