RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 NPBWR1P48145 328 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 STXBP1P61764 594 aaKnown RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 RBM39Q14498 530 aaKnown RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 HYAL4Q2M3T9 481 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 GGTA1PQ4G0N0 100 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ZNF660Q6AZW8 331 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ARL9Q6T311 187 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 C17orf64Q86WR6 236 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 OR9A2Q8NGT5 310 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 FIBINQ8TAL6 211 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 NEIL3Q8TAT5 605 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 WFIKKN2Q8TEU8 576 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 REM1O75628 298 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 C1orf105O95561 183 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 SBK2P0C263 348 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 IL1RNP18510 177 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 CNR1P21554 472 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 SNTB2Q13425 540 aaKnown RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 GPNMBQ14956 572 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 OR4C15Q8NGM1 316 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 SVIPQ8NHG7 77 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 GCDHQ92947 438 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ZNF559Q9BR84 538 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ACSS1Q9NUB1 689 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 WSB2Q9NYS7 404 aaPredicted RBP13.15□□□□□ -0.3
SCARF1-201ENST00000263071 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
SCARF1-201ENST00000263071 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 G3V3Q6 166 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 H0YIV9 168 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF593O00488 134 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 MPZL2O60487 215 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 MT-ND4P03905 459 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 SEMG1P04279 462 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 NME1P15531 152 aaKnown RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 TIMP2P16035 220 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 CCR2P41597 374 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 RAB5CP51148 216 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 DEFB103AP81534 67 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 MESP2Q0VG99 397 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 LBHQ53QV2 105 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 IZUMO1Q8IYV9 350 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 BBS1Q8NFJ9 593 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR51L1Q8NGJ5 315 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR52I1Q8NGK6 324 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 SOSTQ9BQB4 213 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 HMX1Q9NP08 348 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 FARS2O95363 451 aaKnown RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 UGT2B7P16662 529 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 CDH11P55287 796 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 FNDC3BQ53EP0 1204 aaKnown RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 PIP5KL1Q5T9C9 394 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 MISPQ8IVT2 679 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 CBARPQ8N350 705 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR8J1Q8NGP2 316 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF607Q96SK3 696 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 BHLHE41Q9C0J9 482 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR10H2O60403 315 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 GYPBP06028 91 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 CTSLP07711 333 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ANKRD34CP0C6C1 535 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF35P13682 527 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 PAX6P26367 422 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 AHRP35869 848 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ACVR1BP36896 505 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 GIPRP48546 466 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ANXA11P50995 505 aaKnown RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 TMEM215Q68D42 235 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR10H4Q8NGA5 316 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 OR9A1PQ8NGU1 263 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 POC1BQ8TC44 478 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 TFGQ92734 400 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ECHDC3Q96DC8 303 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ATF6BQ99941 703 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 IFT27Q9BW83 186 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 ASF1BQ9NVP2 202 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
SCARF1-201ENST00000263071 C9orf170A2RU37 121 aa13.13□□□□□ -0.31
SCARF1-201ENST00000263071 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
SCARF1-201ENST00000263071 PLPP1O14494 284 aa13.13□□□□□ -0.31
SCARF1-201ENST00000263071 ANXA2P07355 339 aaKnown RBP13.13□□□□□ -0.31
SCARF1-201ENST00000263071 ZNF44P15621 663 aa13.13□□□□□ -0.31
SCARF1-201ENST00000263071 FABP5Q01469 135 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms