RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MAL2Q969L2 176 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ZC3HAV1LQ96H79 300 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 SLC2A13Q96QE2 648 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 TLNRD1Q9H1K6 362 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RLIMQ9NVW2 624 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ZSCAN32Q9NX65 697 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 CNOT2Q9NZN8 540 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 ZNF230Q9UIE0 474 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 WDR45Q9Y484 360 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 LOC102724200A0A096LPH7 203 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 OR2W5A6NFC9 320 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RFPL4AA6NLU0 287 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 CPSF4LA6NMK7 179 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 RFPL4AL1F8VTS6 287 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RNF13O43567 381 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 GP1BAP07359 652 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 GIMD1P0DJR0 217 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 HMGA1P17096 107 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 CD80P33681 288 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RPL3P39023 403 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 RFX3P48380 749 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 IL2P60568 153 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 C3orf38Q5JPI3 329 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ANXA8L1Q5VT79 327 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 C8orf82Q6P1X6 216 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 SSX7Q7RTT5 188 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SLC35F3Q8IY50 421 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ZNF687Q8N1G0 1237 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 PGBD5Q8N414 524 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 PROKR2Q8NFJ6 384 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 OR8S1Q8NH09 359 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 FAM3CQ92520 227 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 PLD4Q96BZ4 506 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SEC22AQ96IW7 307 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 AMDHD1Q96NU7 426 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 F2RL3Q96RI0 385 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 CCNL2Q96S94 520 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 MICU1Q9BPX6 476 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 INPP5KQ9BT40 448 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SOX7Q9BT81 388 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 EBPLQ9BY08 206 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 BRINP2Q9C0B6 783 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 BHLHE41Q9C0J9 482 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 SLC6A16Q9GZN6 736 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ASPDHA6ND91 283 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 UPK3BL1B0FP48 263 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 UPK3BL2E5RIL1 263 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SGK494L7N484 410 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 MAGEB4O15481 346 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 PRKYO43930 277 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SCGNO76038 276 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 OTCP00480 354 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 PRH1P02810 166 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 GIPP09681 153 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 SAGP10523 405 aaPredicted RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 GJA4P35212 333 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 CRYBB2P43320 205 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ACTR1AP61163 376 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RPS14P62263 151 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 POLR2LP62875 67 aaKnown RBP7.8□□□□□ -1.16
LDB3-201ENST00000263066 DPYSL2Q16555 572 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 DUOXA1Q1HG43 343 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 GSG1Q2KHT4 349 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 AMZ1Q400G9 498 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 DCST1Q5T197 706 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 THEM4Q5T1C6 240 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 FAAP20Q6NZ36 180 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ESPNLQ6ZVH7 1005 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 LRP11Q86VZ4 500 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 THNSL2Q86YJ6 484 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 SFTPA1Q8IWL2 248 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 NUBPLQ8TB37 319 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 PITX2Q99697 317 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 C19orf12Q9NSK7 152 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 RNF215Q9Y6U7 377 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 DNAJC13O75165 2243 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 ATRXP46100 2492 aa7.8□□□□□ -1.16
LDB3-201ENST00000263066 A0A1W2PPH5 198 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 TMEM235A6NFC5 223 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 MGAT4DA6NG13 374 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 ZNF705FA8MVS1 300 aaPredicted RBP7.79□□□□□ -1.16
LDB3-201ENST00000263066 SELENOFO60613 162 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 IFNW1P05000 195 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 ZNF705DP0CH99 300 aaPredicted RBP7.79□□□□□ -1.16
LDB3-201ENST00000263066 ZNF705BP0CI00 300 aaPredicted RBP7.79□□□□□ -1.16
LDB3-201ENST00000263066 C5AR1P21730 350 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 MAPK3P27361 379 aaPredicted RBP7.79□□□□□ -1.16
LDB3-201ENST00000263066 HOXA9P31269 272 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 GDNFP39905 211 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 MAPK8P45983 427 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 ZNF155Q12901 538 aaPredicted RBP7.79□□□□□ -1.16
LDB3-201ENST00000263066 OR4D1Q15615 310 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 OR2A2Q6IF42 318 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 FBXO42Q6P3S6 717 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 Q6ZTK2 550 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 S100A7AQ86SG5 101 aa7.79□□□□□ -1.16
LDB3-201ENST00000263066 ZNF283Q8N7M2 679 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms