RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 USP22Q9UPT9 525 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 FAM96BQ9Y3D0 163 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 IGLV3-10A0A075B6K4 115 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 EIF4E2O60573 245 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 EDN3P14138 238 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 UBE2UQ5VVX9 321 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 OR51L1Q8NGJ5 315 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 MS4A8Q9BY19 250 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 C1orf198Q9H425 327 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 NIPAL2Q9H841 368 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 TRAPPC2LQ9UL33 140 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 HSPE1-MOB4S4R3N1 261 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 LSSP48449 732 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 HTRA4P83105 476 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SEMA3BQ13214 749 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF169Q14929 603 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 FAM83HQ6ZRV2 1179 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 IQCF1Q8N6M8 205 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 GLCEO94923 617 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 MAGEA3P43357 314 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RNASE10Q5GAN6 216 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 FAM76BQ5HYJ3 339 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 SBSNQ6UWP8 590 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RFLNAQ6ZTI6 216 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 CNTN4Q8IWV2 1026 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 CNIH3Q8TBE1 160 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ALG8Q9BVK2 526 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 NT5DC2Q9H857 520 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RHBDD3Q9Y3P4 386 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM269A0A1B0GVZ9 245 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM202A6NGA9 273 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 CD300LBA8K4G0 201 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 H0YIV9 168 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 AKR1C4P17516 323 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 RGS19P49795 217 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ROR2Q01974 943 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 IHHQ14623 411 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 HES3Q5TGS1 186 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 FAM83FQ8NEG4 500 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 MAN2C1Q9NTJ4 1040 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 CORINQ9Y5Q5 1042 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 NPFFR2Q9Y5X5 522 aa12.61□□□□□ -0.39
PDGFRB-201ENST00000261799 HRO43593 1189 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SERPINA2P20848 420 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 OR2A2Q6IF42 318 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 OR5W2Q8NH69 310 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 ACOT11Q8WXI4 607 aaPredicted RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 CREB3L1Q96BA8 519 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SPIN2AQ99865 258 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SPIN2BQ9BPZ2 258 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 CLCA1A8K7I4 914 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SLCO2B1O94956 709 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 ARR3P36575 388 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 GMPRP36959 345 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 GPR85P60893 370 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 LTC4SQ16873 150 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 CPOQ8IVL8 374 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 KIAA1958Q8N8K9 716 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 TREX2Q9BQ50 279 aaPredicted RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 PTBP2Q9UKA9 531 aaKnown RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 PRAMEF27A3QJZ7 478 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 RGS11O94810 467 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 P2RX1P51575 399 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 SEC61A1P61619 476 aaKnown RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 CSNK1G2P78368 415 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 GOLM1Q8NBJ4 401 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 MVB12AQ96EY5 273 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 POM121BA6NF01 834 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 GPR39O43194 453 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 FZD7O75084 574 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 NXPH2O95156 264 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 CPT2P23786 658 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 FAM111BQ6SJ93 734 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM200AQ86VY9 491 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 OR6Q1Q8NGQ2 317 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 HHLA2Q9UM44 414 aa12.6□□□□□ -0.39
PDGFRB-201ENST00000261799 RETP07949 1114 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 TNFRSF1BP20333 461 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 TMEM150AQ86TG1 271 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 C1orf87Q8N0U7 546 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 BAHD1Q8TBE0 780 aaPredicted RBP12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 STT3BQ8TCJ2 826 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 SMOXQ9NWM0 555 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 TVP23AA6NH52 213 aa12.59□□□□□ -0.39
PDGFRB-201ENST00000261799 XPNPEP2O43895 674 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms