RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 EPCAMP16422 314 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MRPL41Q8IXM3 137 aaKnown RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 OR6V1Q8N148 313 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ELOVL1Q9BW60 279 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF700Q9H0M5 742 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 LOC390937A0A1W2PQ73 354 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MBLAC1A4D2B0 266 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 SERPINA5P05154 406 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ATP1B2P14415 290 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 GNSP15586 552 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MAPK3P27361 379 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 GABRA5P31644 462 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF84P51523 738 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 CCR9P51686 369 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF155Q12901 538 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 GAMTQ14353 236 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 BAIAP2L2Q6UXY1 529 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 NANOGP1Q8N7R0 232 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 AKR1E2Q96JD6 320 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 UBXN10Q96LJ8 280 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF354BQ96LW1 612 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF382Q96SR6 550 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 EFCAB11Q9BUY7 163 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 TLNRD1Q9H1K6 362 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 A8MVJ9 347 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MCIDASD6RGH6 385 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 STC2O76061 302 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 CLDN12P56749 244 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 VAMP2P63027 116 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MAP4K2Q12851 820 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 C16orf78Q8WTQ4 265 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 MYLIPQ8WY64 445 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 OR1F2PQ96R84 312 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ALX4Q9H161 411 aaPredicted RBP12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ATG5Q9H1Y0 275 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 SYT4Q9H2B2 425 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
TMEM260-201ENST00000261556 A0A0D9SG52 128 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SULT1A3P0DMM9 295 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SULT1A4P0DMN0 295 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 OSMP13725 252 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 STC1P52823 247 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 OR10A3P58181 314 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 NTHL1P78549 312 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ARF1P84077 181 aaKnown RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF628Q5EBL2 1059 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 FAM27D1Q5T7N8 215 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 CBLL1Q75N03 491 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 COMTD1Q86VU5 262 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 KXD1Q9BQD3 176 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SLC35A5Q9BS91 424 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 LEFTY1O75610 366 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 STATHP02808 62 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 WNT1P04628 370 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 GJA4P35212 333 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 VIPR2P41587 438 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 PRAMEF14Q5SWL7 426 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF385CQ66K41 422 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 FRMD1Q8N878 549 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 FBXO15Q8NCQ5 510 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ZC3HAV1LQ96H79 300 aaKnown RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 LRIG1Q96JA1 1093 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 VPS29Q9UBQ0 182 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 TAC3Q9UHF0 121 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 MANBAO00462 879 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 KIAA0355O15063 1070 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SEC14L5O43304 696 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 BPIP17213 487 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 PNLIPRP1P54315 467 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 TMEM201Q5SNT2 666 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SSX7Q7RTT5 188 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 GALNTL5Q7Z4T8 443 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SLC22A18Q96BI1 424 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
TMEM260-201ENST00000261556 TMEM27Q9HBJ8 222 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF587BE7ETH6 402 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 CD34P28906 385 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 IGFALSP35858 605 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 EPHA4P54764 986 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 LMAN2Q12907 356 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 SFXN4Q6P4A7 337 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 TMEM207Q6UWW9 146 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 PXKQ7Z7A4 578 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 ZNF227Q86WZ6 799 aa12.11□□□□□ -0.47
TMEM260-201ENST00000261556 POC1BQ8TC44 478 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms