RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ASAH1Q13510 395 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 ENTPD8Q5MY95 495 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 FAM219BQ5XKK7 198 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF776Q68DI1 518 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 CNKSR3Q6P9H4 555 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 TRAPPC6BQ86SZ2 158 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR6M1Q8NGM8 313 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 HINT2Q9BX68 163 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 R3HDMLQ9H3Y0 253 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 D6RAR5 112 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 PHYHO14832 338 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 VEGFDO43915 354 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 EGFP01133 1207 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 HMGN2P05204 90 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 PIM1P11309 404 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 IL1RNP18510 177 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 SAXO2Q658L1 398 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 GAREM2Q75VX8 874 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 DPPA4Q7L190 304 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 PRR18Q8N4B5 295 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 DEFB119Q8N690 84 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR4C15Q8NGM1 316 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 HCAR1Q9BXC0 346 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 C1QTNF2Q9BXJ5 285 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 DDX60Q8IY21 1712 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 GABRR1P24046 479 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 TAGLN2P37802 199 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 BLKP51451 505 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 GRM7Q14831 915 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 RPE65Q16518 533 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 ADGRF3Q8IZF5 1079 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 GHSRQ92847 366 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 ISL2Q96A47 359 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC6A20Q9NP91 592 aa9.11□□□□□ -0.95
CTDSPL2-201ENST00000260327 SURF4O15260 269 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 GPX5O75715 221 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 UBL3O95164 117 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 AOAHP28039 575 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 CTSCP53634 463 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC35A2P78381 396 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 FIBINQ8TAL6 211 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 KIAA1143Q96AT1 154 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 BPIFA2Q96DR5 249 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 PLEKHJ1Q9NW61 149 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC22A23A1A5C7 686 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 KCNK5O95279 499 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF44P15621 663 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 FUT1P19526 365 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 UBE2MP61081 183 aaKnown RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SULF2Q8IWU5 870 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 FOXJ1Q92949 421 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF587Q96SQ5 575 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 C2orf42Q9NWW7 574 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ADAM10O14672 748 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 DOK2O60496 412 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ELK1P19419 428 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SOX9P48436 509 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 MRPS34P82930 218 aaKnown RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM41BQ5BJD5 291 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 COX15Q7KZN9 410 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ANKRD53Q8N9V6 530 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ABHD4Q8TB40 342 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 PLCH1Q4KWH8 1693 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM235A6NFC5 223 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 TRAPPC6AO75865 159 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 MSX1P28360 303 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SOHLH1Q5JUK2 328 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ZNF322Q6U7Q0 402 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 CDS1Q92903 461 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC25A46Q96AG3 418 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 CAPNS2Q96L46 248 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR11A1Q9GZK7 315 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 CWH43Q9H720 699 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 GCM1Q9NP62 436 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 KCMF1Q9P0J7 381 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 PLEKHM1Q9Y4G2 1056 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 RAB40ALP0C0E4 278 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 HOXB2P14652 356 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 FASLGP48023 281 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 GPLD1P80108 840 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 SHC2P98077 582 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 CLINT1Q14677 625 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 TMEM35AQ53FP2 167 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 C3orf38Q5JPI3 329 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 COX20Q5RI15 118 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 KDM4DQ6B0I6 523 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 MRPL10Q7Z7H8 261 aaKnown RBP9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 OR13C9Q8NGT0 318 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 ASB11Q8WXH4 323 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 RAB40AQ8WXH6 277 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 NMNAT2Q9BZQ4 307 aa9.1□□□□□ -0.95
CTDSPL2-201ENST00000260327 MBLAC1A4D2B0 266 aaPredicted RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 P2RX6O15547 441 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 DNAJB6O75190 326 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 SLC19A1P41440 591 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 UBE2IP63279 158 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 CDK3Q00526 305 aa9.09□□□□□ -0.95
CTDSPL2-201ENST00000260327 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms