RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 EMBQ6PCB8 327 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 WDR31Q8NA23 367 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 C1orf162Q8NEQ5 155 aaPredicted RBP16.2■□□□□ 0.18
KHDC1-201ENST00000257765 TCP10LQ8TDR4 215 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 SHARPINQ9H0F6 387 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 EXOSC3Q9NQT5 275 aaKnown RBP16.2■□□□□ 0.18
KHDC1-201ENST00000257765 ASIC5Q9NY37 505 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 TMEM181Q9P2C4 612 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 UPB1Q9UBR1 384 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 DCTN4Q9UJW0 460 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 SLC9A8Q9Y2E8 581 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 PMF1-BGLAPU3KQ54 211 aa16.2■□□□□ 0.18
KHDC1-201ENST00000257765 SPAG7O75391 227 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 CCNA2P20248 432 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 USF1P22415 310 aaPredicted RBP16.19■□□□□ 0.18
KHDC1-201ENST00000257765 HPCAP84074 193 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 FUT5Q11128 374 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 KRTAP24-1Q3LI83 254 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 TNFAIP8L2Q6P589 184 aaPredicted RBP16.19■□□□□ 0.18
KHDC1-201ENST00000257765 FRRS1Q6ZNA5 592 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 ADGRG3Q86Y34 549 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 RIBC1Q8N443 379 aaPredicted RBP16.19■□□□□ 0.18
KHDC1-201ENST00000257765 ARFGAP2Q8N6H7 521 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 XAGE5Q8WWM1 108 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 RAB8BQ92930 207 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 ROPN1LQ96C74 230 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 SAP130Q9H0E3 1048 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 SLC17A5Q9NRA2 495 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 PARPBPQ9NWS1 579 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 TRAPPC4Q9Y296 219 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 FLVCR1Q9Y5Y0 555 aa16.19■□□□□ 0.18
KHDC1-201ENST00000257765 LMX1BO60663 402 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 UQCRC2P22695 453 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 APOBEC3AP31941 199 aaPredicted RBP16.18■□□□□ 0.18
KHDC1-201ENST00000257765 HTR3AP46098 478 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 KHKP50053 298 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 PHC1P78364 1004 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 KCNJ10P78508 379 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 LSM11P83369 360 aaKnown RBP eCLIP16.18■□□□□ 0.18
KHDC1-201ENST00000257765 H3F3AP84243 136 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 SLC25A3Q00325 362 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 TGFBR3Q03167 851 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 PLAURQ03405 335 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 SMU1Q2TAY7 513 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 HMGN2P46Q86SG4 172 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 OR8J2Q8NGG1 315 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 SLC7A10Q9NS82 523 aa16.18■□□□□ 0.18
KHDC1-201ENST00000257765 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.18■□□□□ 0.18
KHDC1-201ENST00000257765 TMED7-TICAM2A0A0A6YYA0 188 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 ATP6V1G2-DDX39BF2Z307 99 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 EIF1BO60739 113 aaKnown RBP16.17■□□□□ 0.18
KHDC1-201ENST00000257765 LY6HO94772 140 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 CPSF4O95639 269 aaKnown RBP16.17■□□□□ 0.18
KHDC1-201ENST00000257765 IDH2P48735 452 aaKnown RBP16.17■□□□□ 0.18
KHDC1-201ENST00000257765 GZMKP49863 264 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 SLC35A1P78382 337 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 GPAT3Q53EU6 434 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 C1QTNF12Q5T7M4 302 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 TSPO2Q5TGU0 170 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 SAXO2Q658L1 398 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 KLHL24Q6TFL4 600 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 ANKRD46Q86W74 232 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 DDIT4LQ96D03 193 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 ZIM3Q96PE6 472 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 NAA11Q9BSU3 229 aaPredicted RBP16.17■□□□□ 0.18
KHDC1-201ENST00000257765 DPY30Q9C005 99 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 TMED7Q9Y3B3 224 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 FKBP7Q9Y680 259 aa16.17■□□□□ 0.18
KHDC1-201ENST00000257765 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.17■□□□□ 0.18
KHDC1-201ENST00000257765 CLDN24A6NM45 220 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 ZNF208O43345 1280 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 SCN2BO60939 215 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 BPGMP07738 259 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 NUDT17P0C025 328 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 IMPDH2P12268 514 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 IGFBP5P24593 272 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 THBS2P35442 1172 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PDLIM4P50479 330 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 POLR2HP52434 150 aaKnown RBP16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PRPS1P60891 318 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PDCD2Q16342 344 aaPredicted RBP16.16■□□□□ 0.18
KHDC1-201ENST00000257765 ANXA8L1Q5VT79 327 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 AP1ARQ63HQ0 302 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PMM1Q92871 262 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 ZG16BQ96DA0 208 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 NEURL3Q96EH8 262 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 MARCOQ9UEW3 520 aaPredicted RBP16.16■□□□□ 0.18
KHDC1-201ENST00000257765 KCNS2Q9ULS6 477 aa16.16■□□□□ 0.18
KHDC1-201ENST00000257765 PRSS51A0A1B0GVH4 220 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 TMEM72A0PK05 275 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 AP3D1O14617 1153 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 WNT11O96014 354 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 SRD5A1P18405 259 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 MPGP29372 298 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 CHI3L1P36222 383 aaPredicted RBP16.15■□□□□ 0.18
KHDC1-201ENST00000257765 GGTLC2Q14390 218 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 SLC17A1Q14916 467 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 FAM166AQ6J272 317 aa16.15■□□□□ 0.18
KHDC1-201ENST00000257765 PAQR6Q6TCH4 344 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms