RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZC3H12DA2A288 527 aaKnown RBP18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF724A8MTY0 619 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF208O43345 1280 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 BMP2P12643 396 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 PRG2P13727 222 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 PPIBP23284 216 aaKnown RBP18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 CXCR1P25024 350 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 EDNRAP25101 427 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 DEFB113Q30KQ7 82 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 SERPINA11Q86U17 422 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 C10orf111Q8N326 155 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 MBD6Q96DN6 1003 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 SPATA9Q9BWV2 254 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 TMEM45AQ9NWC5 275 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 TRIM33Q9UPN9 1127 aa18.75■□□□□ 0.59
HCFC1R1-201ENST00000248089 A0A1W2PP18 115 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF814B7Z6K7 855 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 FRS3O43559 492 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 DNPH1O43598 174 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 CD53P19397 219 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 ACAA2P42765 397 aaKnown RBP18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZSWIM7Q19AV6 140 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 BEX5Q5H9J7 111 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 SFRP5Q5T4F7 317 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 PRAMEF8Q5VWM4 474 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 PRAMEF7Q5VXH5 474 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 WBP2NLQ6ICG8 309 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 Q6ZT83 130 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 CCDC103Q8IW40 242 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 STON2Q8WXE9 905 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 HDHD5Q9BXW7 423 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 OR10A4Q9H209 315 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 IKZF5Q9H5V7 419 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 BCL2L10Q9HD36 194 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 TRAPPC4Q9Y296 219 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 NOSIPQ9Y314 301 aaKnown RBP18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 CHST2Q9Y4C5 530 aa18.74■□□□□ 0.59
HCFC1R1-201ENST00000248089 DSCAMO60469 2012 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 IGKV3D-15A0A087WSY6 115 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 TRBV5-3A0A0A0MS03 114 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF716A6NP11 495 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 EVPLLA8MZ36 301 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 KLF4O43474 513 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 RAMP1O60894 148 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 LYZL6O75951 148 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 PGM3O95394 542 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 IGHV3-9P01782 118 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 ARAFP10398 606 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 IMPDH2P12268 514 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 LOXP28300 417 aaPredicted RBP18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 SLC35A1P78382 337 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 BNIP2Q12982 314 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 P2RY6Q15077 328 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 PLPPR2Q96GM1 343 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 ADAM19Q9H013 955 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 LEF1Q9UJU2 399 aaPredicted RBP18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 CORO2BQ9UQ03 480 aa18.73■□□□□ 0.59
HCFC1R1-201ENST00000248089 ANGPT2O15123 496 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 FPR1P21462 350 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 IDUAP35475 653 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 HOXC5Q00444 222 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 CDK6Q00534 326 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 ITGADQ13349 1161 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 CAPRIN1Q14444 709 aaKnown RBP18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 PDK3Q15120 406 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 STK11Q15831 433 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 BHLHA15Q7RTS1 189 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 DHDDSQ86SQ9 333 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 UBE2J2Q8N2K1 259 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 APH1AQ96BI3 265 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 CPPED1Q9BRF8 314 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 SIKE1Q9BRV8 207 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 NAA11Q9BSU3 229 aaPredicted RBP18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF385DQ9H6B1 395 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 ZNF446Q9NWS9 450 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 ROS1P08922 2347 aa18.72■□□□□ 0.59
HCFC1R1-201ENST00000248089 EIF1BO60739 113 aaKnown RBP18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 MAP2K6P52564 334 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 NR1H2P55055 460 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 CEACAM7Q14002 265 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 SCARB2Q14108 478 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 OR7A5Q15622 319 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 REEP3Q6NUK4 255 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 KRT73Q86Y46 540 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 CCL19Q99731 98 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 NDUFAF1Q9Y375 327 aa18.71■□□□□ 0.59
HCFC1R1-201ENST00000248089 FLNAP21333 2647 aaKnown RBP18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 GPR171O14626 319 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 GPIP06744 558 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 ETS2P15036 469 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 SLC6A2P23975 617 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 AQP1P29972 269 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 ADSLP30566 484 aaPredicted RBP18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 SLC16A1P53985 500 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 SF3A3Q12874 501 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 TAB1Q15750 504 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 ACKR1Q16570 336 aa18.7■□□□□ 0.58
HCFC1R1-201ENST00000248089 OTUD3Q5T2D3 398 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms