RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ERV3-1Q14264 604 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 ZNF658BQ4V348 819 aaPredicted RBP15.58■□□□□ 0.08
SGPP1-201ENST00000247225 TMEM69Q5SWH9 247 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 ZDHHC1Q8WTX9 485 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 CAPNS2Q96L46 248 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 OR1F2PQ96R84 312 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 KCNK15Q9H427 330 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 EMC7Q9NPA0 242 aa15.58■□□□□ 0.08
SGPP1-201ENST00000247225 EXOGQ9Y2C4 368 aaKnown RBP15.58■□□□□ 0.08
SGPP1-201ENST00000247225 H3BUI4 141 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 CISD3P0C7P0 127 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 TMIGD3P0DMS9 266 aaPredicted RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 DDX6P26196 483 aaKnown RBP eCLIP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 ZP1P60852 638 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 METTL27Q8N6F8 245 aaPredicted RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 RELL2Q8NC24 303 aaPredicted RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 ADAMTS14Q8WXS8 1223 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 RASD2Q96D21 266 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 TIMP4Q99727 224 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 TMEM168Q9H0V1 697 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 ISYNA1Q9NPH2 558 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 OR10H2O60403 315 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 SQSTM1Q13501 440 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 DCST2Q5T1A1 773 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 IDO2Q6ZQW0 420 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 TMED4Q7Z7H5 227 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 ZNRF4Q8WWF5 429 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 GPR137Q96N19 417 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 MEPEQ9NQ76 525 aaPredicted RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 PHF11Q9UIL8 331 aa15.57■□□□□ 0.08
SGPP1-201ENST00000247225 MRPS2Q9Y399 296 aaKnown RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 MDC1Q14676 2089 aaKnown RBP15.57■□□□□ 0.08
SGPP1-201ENST00000247225 OR8G3PP0DMU2 310 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 UBL4AP11441 157 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 FRKP42685 505 aaPredicted RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 VASPP50552 380 aaPredicted RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 RPS15P62841 145 aaKnown RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 HTR4Q13639 388 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ALG10BQ5I7T1 473 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 CD276Q5ZPR3 534 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 TMPRSS12Q86WS5 348 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 SFTPA2Q8IWL1 248 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 GJD3Q8N144 294 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 SYNPRQ8TBG9 265 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PATE1Q8WXA2 126 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 SRMSQ9H3Y6 488 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ZMAT3Q9HA38 289 aaKnown RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ADGRL4Q9HBW9 690 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PHPT1Q9NRX4 125 aaPredicted RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 A0A1B0GVI7 797 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PEX14O75381 377 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 UBL3O95164 117 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 CFL1P23528 166 aaKnown RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 AMZ1Q400G9 498 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 HEPHL1Q6MZM0 1159 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ENPP7Q6UWV6 458 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 NDUFAF7Q7L592 441 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 TNFAIP8L1Q8WVP5 186 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 RBPMSQ93062 196 aaKnown RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PELI1Q96FA3 418 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 GSX2Q9BZM3 304 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 HEXA-AS1Q9H8Q6 139 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 LIN7BQ9HAP6 207 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 HRASLSQ9HDD0 168 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 KCNE5Q9UJ90 142 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 TLX1P31314 330 aaPredicted RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ACTR1BP42025 376 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ACTR1AP61163 376 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PITPNAQ00169 270 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 DEFA5Q01523 94 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 RUNX2Q13950 521 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ZPLD1Q8TCW7 415 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 ZNF296Q8WUU4 475 aaPredicted RBP15.56■□□□□ 0.08
SGPP1-201ENST00000247225 PRSS27Q9BQR3 290 aa15.56■□□□□ 0.08
SGPP1-201ENST00000247225 SLC35G6P0C7Q6 338 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 PSMB1P20618 241 aaKnown RBP15.55■□□□□ 0.08
SGPP1-201ENST00000247225 PRKAR1BP31321 381 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 ZNF136P52737 540 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 PON3Q15166 354 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 TMEM44Q2T9K0 475 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 C3P1Q6ZMU1 363 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 SORCS2Q96PQ0 1159 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 CDV3Q9UKY7 258 aaKnown RBP15.55■□□□□ 0.08
SGPP1-201ENST00000247225 SLC35A3Q9Y2D2 325 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 A0A0G2JK05 382 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 A0A1W2PQU0 124 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 SYT5O00445 386 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 LILRB3O75022 631 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 GPANK1O95872 356 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 CXCL10P02778 98 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 ACSM4P0C7M7 580 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 NDUFS1P28331 727 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 CCR9P51686 369 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 SIRPAP78324 504 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 ARHGAP19Q14CB8 494 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 COL28A1Q2UY09 1125 aa15.55■□□□□ 0.08
SGPP1-201ENST00000247225 LINC00303Q3SY05 128 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms