RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CTPS2Q9NRF8 586 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 FBXL21Q9UKT6 434 aa18.38■□□□□ 0.53
HOXC13-201ENST00000243056 PLXNA2O75051 1894 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 EBLN1P0CF75 366 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 COX7A2P14406 83 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 CPN1P15169 458 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 LAP3P28838 519 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 CASP6P55212 293 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 MRPS21P82921 87 aaKnown RBP18.37■□□□□ 0.53
HOXC13-201ENST00000243056 PON3Q15166 354 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 ANKRD39Q53RE8 183 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 C18orf63Q68DL7 685 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 MEIOBQ8N635 442 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 ZBTB2Q8N680 514 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 NFKBIDQ8NI38 313 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 FGF11Q92914 225 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 PNPLA2Q96AD5 504 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 C14orf144Q96I85 54 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 EGFL8Q99944 293 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 FAIM2Q9BWQ8 316 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 TPSD1Q9BZJ3 242 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 GULP1Q9UBP9 304 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 OPN4Q9UHM6 478 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 NCOR1O75376 2440 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 E9PI62 339 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 H0Y8X5 98 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 LATO43561 262 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 IFNGR1P15260 489 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 MMP15P51511 669 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 CLDN2P57739 230 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 FAM76BQ5HYJ3 339 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 OR7E24Q6IFN5 339 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF852Q6ZMS4 543 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 PRSS45Q7RTY3 260 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 SELENOMQ8WWX9 145 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 PKP4Q99569 1192 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 TREM2Q9NZC2 230 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 WWOXQ9NZC7 414 aa18.37■□□□□ 0.53
HOXC13-201ENST00000243056 SLC31A2O15432 143 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 EIF4E2O60573 245 aaKnown RBP18.36■□□□□ 0.53
HOXC13-201ENST00000243056 ACP2P11117 423 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 PDHA2P29803 388 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 MTNR1BP49286 362 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 FZD5Q13467 585 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 C2orf68Q2NKX9 166 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 ZDHHC20Q5W0Z9 365 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 ESPNLQ6ZVH7 1005 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 LMNTD1Q8N9Z9 388 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 STK35Q8TDR2 534 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 RGMAQ96B86 450 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 GPATCH2Q9NW75 528 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 MMP17Q9ULZ9 603 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 PCDHGA5Q9Y5G8 931 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 PCDHGA1Q9Y5H4 931 aa18.36■□□□□ 0.53
HOXC13-201ENST00000243056 SLC9B1P1A6NJY1 282 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 COLCA2A8K830 154 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 FOLR2P14207 255 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF44P15621 663 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ANXA7P20073 488 aaKnown RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 CRATP43155 626 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 LIM2P55344 173 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 FOXK2Q01167 660 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 IRF4Q15306 451 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 H3F3CQ6NXT2 135 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ANGPTL8Q6UXH0 198 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 FAM122BQ7Z309 247 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 TRAPPC5Q8IUR0 188 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 MISPQ8IVT2 679 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 RNF175Q8N4F7 328 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 NECAB3Q96P71 396 aaPredicted RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 RNF122Q9H9V4 155 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 NPC1O15118 1278 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF8P17098 575 aaPredicted RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 PSMB1P20618 241 aaKnown RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 IDSP22304 550 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 H2BFSP57053 126 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 RAB40BQ12829 278 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 SF1Q15637 639 aaKnown RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF791Q3KP31 576 aaPredicted RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 LYPLAL1Q5VWZ2 237 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 SFXN4Q6P4A7 337 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 UQCC3Q6UW78 93 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 IKBIPQ70UQ0 350 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 SYT12Q8IV01 421 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ZNF547Q8IVP9 402 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 OR5M1Q8NGP8 315 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 ALX4Q9H161 411 aaPredicted RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 POLR2J3Q9H1A7 115 aaKnown RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 TLNRD1Q9H1K6 362 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 PIGMQ9H3S5 423 aa18.35■□□□□ 0.53
HOXC13-201ENST00000243056 FAM120CQ9NX05 1096 aaKnown RBP18.35■□□□□ 0.53
HOXC13-201ENST00000243056 A0A1W2PRB8 838 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 PLRG1O43660 514 aaKnown RBP18.34■□□□□ 0.53
HOXC13-201ENST00000243056 OR10H3O60404 316 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 UBXN7O94888 489 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 HEXAP06865 529 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 PRPS1L1P21108 318 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SHC1P29353 583 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 HOXA6P31267 233 aa18.34■□□□□ 0.53
HOXC13-201ENST00000243056 SLC1A3P43003 542 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms