RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SPNP16150 400 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 RPS4Y1P22090 263 aaKnown RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CPN2P22792 545 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 HTR1FP30939 366 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 GDI1P31150 447 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 RPS5P46782 204 aaKnown RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CDH11P55287 796 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CXADRP78310 365 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 SCN1BQ07699 218 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 ASAH1Q13510 395 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 GPR50Q13585 617 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 NFATC4Q14934 902 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF79Q15937 498 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 PGGHGQ32M88 737 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF750Q32MQ0 723 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 LRIT3Q3SXY7 679 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 GLYR1Q49A26 553 aaPredicted RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 MANEAQ5SRI9 462 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 DDI2Q5TDH0 399 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 NXNL2Q5VZ03 156 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 RPL13AP3Q6NVV1 102 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 PAQR6Q6TCH4 344 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 METAP1DQ6UB28 335 aaPredicted RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 BCDIN3DQ7Z5W3 292 aaKnown RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 VRK2Q86Y07 508 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CACUL1Q86Y37 369 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 GID4Q8IVV7 300 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CAMKVQ8NCB2 501 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 OR2T33Q8NG76 320 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 OR4K14Q8NGD5 310 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 TM9SF4Q92544 642 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 KLK6Q92876 244 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 SLC41A3Q96GZ6 507 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 MCHR1Q99705 422 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 CTRCQ99895 268 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 ARPC5LQ9BPX5 153 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 TRMT61BQ9BVS5 477 aaKnown RBP7.24□□□□□ -1.25
CXCR4-201ENST00000241393 PIGUQ9H490 435 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 EGLN3Q9H6Z9 239 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 ANKRA2Q9H9E1 313 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 POLE3Q9NRF9 147 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D29Q9UFV1 150 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 MOSPD1Q9UJG1 213 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D24Q9ULP9 559 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 WDR45Q9Y484 360 aa7.24□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3DA0A087WVF3 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3IA0A087WXS9 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3EA0A087X179 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 CPSF4LA6NMK7 179 aaKnown RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3LB9A6J9 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 HLA-DPB1P04440 258 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 DBIP07108 87 aaKnown RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 GUSBP08236 651 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3HP0C7X1 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 C8orf89P0DMQ9 161 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 ALPPL2P10696 532 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 IL7P13232 177 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 CD53P19397 219 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SLC1A3P43003 542 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 CAPZA2P47755 286 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 PDX1P52945 283 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 PPP3R1P63098 170 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 EEF1A1P68104 462 aaKnown RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 DYRK1AQ13627 763 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 BCL2A1Q16548 175 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TYW3Q6IPR3 259 aaKnown RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3CQ6IPX1 549 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 MZT2AQ6P582 158 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 ABHD13Q7L211 337 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 OLIG3Q7RTU3 272 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 RANBP3LQ86VV4 465 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 LAX1Q8IWV1 398 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 UBQLNLQ8IYU4 475 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TBC1D3Q8IZP1 549 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 OR8H2Q8N162 312 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SLC43A2Q8N370 569 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 OR7G2Q8NG99 324 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 FLVCR1-AS1Q8TAF5 88 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SLC9A6Q92581 669 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TMEM41AQ96HV5 264 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 OR2A5Q96R48 311 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 STACQ99469 402 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 NEU1Q99519 415 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 MACROD1Q9BQ69 325 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 ZNF350Q9GZX5 532 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SRMSQ9H3Y6 488 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SYNPO2LQ9H987 977 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 DUSP22Q9NRW4 184 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 PLEKHB1Q9UF11 243 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 DAPP1Q9UN19 280 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 C19orf53Q9UNZ5 99 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 NCKAP1Q9Y2A7 1128 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TMEM5Q9Y2B1 443 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 CAB39Q9Y376 341 aaPredicted RBP7.23□□□□□ -1.25
CXCR4-201ENST00000241393 ENTPD2Q9Y5L3 495 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 SLC22A7Q9Y694 548 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 DOCK8Q8NF50 2099 aa7.23□□□□□ -1.25
CXCR4-201ENST00000241393 TRAPPC13A5PLN9 417 aa7.22□□□□□ -1.25
CXCR4-201ENST00000241393 A6NCN8 305 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms