RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ARHGEF7Q14155 803 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 NDUFAF6Q330K2 333 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 ENTPD8Q5MY95 495 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 UMODL1-AS1Q8N2C9 162 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 RNF141Q8WVD5 230 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 PSMG2Q969U7 264 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 TIMP4Q99727 224 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 RHOFQ9HBH0 211 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 ANGPT4Q9Y264 503 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 COL4A4P53420 1690 aaPredicted RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 OR5H14A6NHG9 310 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 RNASEK-C17orf49H0YIS7 233 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 CAV2P51636 162 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 NKPD1Q17RQ9 610 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 ZDHHC20Q5W0Z9 365 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 PODNL1Q6PEZ8 512 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 TMPRSS11BQ86T26 416 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 SLC35A5Q9BS91 424 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 WRAP53Q9BUR4 548 aaKnown RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 RSPO3Q9BXY4 272 aaPredicted RBP12.05□□□□□ -0.48
MSH2-201ENST00000233146 PTGES2Q9H7Z7 377 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 TMEM30AQ9NV96 361 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 TAS2R10Q9NYW0 307 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 TRPV2Q9Y5S1 764 aa12.05□□□□□ -0.48
MSH2-201ENST00000233146 A8MWP6 167 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 F5H0A9 414 aaPredicted RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 J3QRE1 110 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 RAB3DO95716 219 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ACP5P13686 325 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 MC4RP32245 332 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 RAP1AP62834 184 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 MRPS10P82664 201 aaKnown RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 HTRA4P83105 476 aaPredicted RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 BEST3Q8N1M1 668 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 POC1BQ8TC44 478 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 F2RL3Q96RI0 385 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 TRIB3Q96RU7 358 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ZPBPQ9BS86 351 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 UBQLN3Q9H347 655 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 RNASET2O00584 256 aaKnown RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 F10P00742 488 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 FGBP02675 491 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 C6P13671 934 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ACVRL1P37023 503 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ADH7P40394 386 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 HBA1P69905 142 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 RPE65Q16518 533 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 RNASE10Q5GAN6 216 aaKnown RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 TRIM40Q6P9F5 258 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 OR5W2Q8NH69 310 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 NUBPLQ8TB37 319 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 LGALS14Q8TCE9 139 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 EGLN3Q9H6Z9 239 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 TRAV1-2A0A0B4J238 106 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ANKRD61A6NGH8 418 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 PRSS47A8MTI9 375 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 PLPP2O43688 288 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 MSX1P28360 303 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 PBLDP30039 288 aaPredicted RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 CASRP41180 1078 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 EPHB3P54753 998 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 SMIM11AP58511 58 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ARL9Q6T311 187 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 VITQ6UXI7 678 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 RBM45Q8IUH3 476 aaKnown RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 C19orf47Q8N9M1 422 aaKnown RBP12.04□□□□□ -0.48
MSH2-201ENST00000233146 OR5AP2Q8NGF4 316 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 OR56B1Q8NGI3 324 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ROBO4Q8WZ75 1007 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 SLC32A1Q9H598 525 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 MCM3APO60318 1980 aa12.04□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3DA0A087WVF3 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3IA0A087WXS9 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3EA0A087X179 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3KA0A087X1G2 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3FA6NER0 549 aaPredicted RBP12.03□□□□□ -0.48
MSH2-201ENST00000233146 OR2AT4A6NND4 320 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 TBC1D3LB9A6J9 549 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MFNGO00587 321 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 AK1P00568 194 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 RLN1P04808 185 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 CD5P06127 495 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 FAM157CP0CG43 387 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MYOGP15173 224 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 MAS1LP35410 378 aa12.03□□□□□ -0.48
MSH2-201ENST00000233146 PTH2RP49190 550 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms