RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MCEMP1Q8IX19 187 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 HIPK4Q8NE63 616 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 OR8J3Q8NGG0 315 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 TMEM234Q8WY98 164 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 ARHGDIGQ99819 225 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 PSD2Q9BQI7 771 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 GALNT8Q9NY28 637 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 CHRNA9Q9UGM1 479 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 IFT52Q9Y366 437 aa12.23□□□□□ -0.45
VEGFA-201ENST00000230480 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 NME4O00746 187 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LGI1O95970 557 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 NPPAP01160 153 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 CD8BP10966 210 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 PCGF2P35227 344 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LARS2Q15031 903 aaKnown RBP12.22□□□□□ -0.45
VEGFA-201ENST00000230480 NRF1Q16656 503 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 ABLIM2Q6H8Q1 611 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 C3orf33Q6P1S2 294 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LUZP2Q86TE4 346 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LURAP1LQ8IV03 231 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 TUSC5Q8IXB3 177 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LSMEM1Q8N8F7 131 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 SMYD1Q8NB12 490 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 C11orf65Q8NCR3 313 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF563Q8TA94 476 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 LINC01560Q8TB33 94 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 SLC35B4Q969S0 331 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 GMPPAQ96IJ6 420 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-201ENST00000230480 OR5B2Q96R09 309 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF300Q96RE9 604 aaPredicted RBP12.22□□□□□ -0.45
VEGFA-201ENST00000230480 PTDSS2Q9BVG9 487 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 CRIM1Q9NZV1 1036 aa12.22□□□□□ -0.45
VEGFA-201ENST00000230480 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.45
VEGFA-201ENST00000230480 A0A1B0GWA3 101 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 A0A1W2PPR1 153 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 FTCDNL1E5RQL4 147 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 MSTNO14793 375 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 SIAH2O43255 324 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF208O43345 1280 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 CYTIPO60759 359 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 COX6B1P14854 86 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 AGTR1P30556 359 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 POLR2HP52434 150 aaKnown RBP12.21□□□□□ -0.45
VEGFA-201ENST00000230480 LTBQ06643 244 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 GNA13Q14344 377 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 WBP2NLQ6ICG8 309 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 NHLRC1Q6VVB1 395 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 LINC00114Q6XXX2 140 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 FCRLAQ7L513 359 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 CHMP1BQ7LBR1 199 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 P4HA3Q7Z4N8 544 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 CCDC103Q8IW40 242 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF440Q8IYI8 595 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 OR6T1Q8NGN1 323 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 CPNE4Q96A23 557 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-201ENST00000230480 C14orf79Q96F83 325 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 ARL8BQ9NVJ2 186 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.45
VEGFA-201ENST00000230480 PACSIN3Q9UKS6 424 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 ZNF232Q9UNY5 417 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 CORO2BQ9UQ03 480 aa12.21□□□□□ -0.45
VEGFA-201ENST00000230480 LIPT2A6NK58 231 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 C5orf58C9J3I9 102 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 M0R3H8 397 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 AIM2O14862 343 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 EEF1E1O43324 174 aaKnown RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 CCDC22O60826 627 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 PMS2P2O95744 297 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 FESP07332 822 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 ME2P23368 584 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 UQCRC1P31930 480 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 PCYT1AP49585 367 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 CLK1P49759 484 aaKnown RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 CYP51A1Q16850 503 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 HACD2Q6Y1H2 254 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 WDR88Q6ZMY6 472 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 ZNF550Q7Z398 422 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 TSEN54Q7Z6J9 526 aaKnown RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 CADM2Q8N3J6 435 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 CNEP1R1Q8N9A8 125 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 ZIC4Q8N9L1 334 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 SLC25A43Q8WUT9 341 aaPredicted RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 REXO5Q96IC2 774 aaKnown RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 RBM24Q9BX46 236 aaKnown RBP12.2□□□□□ -0.46
VEGFA-201ENST00000230480 POTEKPQ9BYX7 375 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 PIGMQ9H3S5 423 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
VEGFA-201ENST00000230480 OTOGQ6ZRI0 2925 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 IGKV3D-15A0A087WSY6 115 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 A0A0B4J2E0 115 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 A0A1B0GX12 115 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 SULT2B1O00204 365 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 THBDP07204 575 aa12.19□□□□□ -0.46
VEGFA-201ENST00000230480 TNFRSF1BP20333 461 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms