RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PTP4A3O75365 173 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 SLC2A5P22732 501 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 ACAA2P42765 397 aaKnown RBP20.4■□□□□ 0.86
CCDC9-201ENST00000221922 STARD6P59095 220 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 TAS2R43P59537 309 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 ZNF141Q15928 474 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 KLHL12Q53G59 568 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 PLA1AQ53H76 456 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 SFXN4Q6P4A7 337 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 ZC3H14Q6PJT7 736 aaKnown RBP20.4■□□□□ 0.86
CCDC9-201ENST00000221922 PXKQ7Z7A4 578 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 LSRQ86X29 649 aaPredicted RBP20.4■□□□□ 0.86
CCDC9-201ENST00000221922 OR4C6Q8NH72 309 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 THAP7Q9BT49 309 aaPredicted RBP20.4■□□□□ 0.86
CCDC9-201ENST00000221922 ZMIZ1Q9ULJ6 1067 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 CACNA1IQ9P0X4 2223 aa20.4■□□□□ 0.86
CCDC9-201ENST00000221922 A0A0G2JK05 382 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 LANCL1O43813 399 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 ZNF780AO75290 641 aaPredicted RBP20.39■□□□□ 0.86
CCDC9-201ENST00000221922 REM1O75628 298 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 SC5DO75845 299 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 TFPIP10646 304 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 HK1P19367 917 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 GABRA4P48169 554 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 PITPNBP48739 271 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 RAB25P57735 213 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 FGFBP1Q14512 234 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 ARL9Q6T311 187 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 CMIPQ8IY22 773 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 SDR16C5Q8N3Y7 309 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 ABHD4Q8TB40 342 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 AKAP1Q92667 903 aaKnown RBP eCLIP20.39■□□□□ 0.869e-8■■■□□ 15.2
CCDC9-201ENST00000221922 RFT1Q96AA3 541 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 FOXQ1Q9C009 403 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.39■□□□□ 0.861e-6■■■■□ 22.4
CCDC9-201ENST00000221922 RASD1Q9Y272 281 aa20.39■□□□□ 0.86
CCDC9-201ENST00000221922 TGFBR3LH3BV60 316 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 PAHP00439 452 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 IGKV1D-16P01601 117 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 SBK2P0C263 348 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 IL9P15248 144 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF3P17036 446 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 MAOBP27338 520 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 E2F1Q01094 437 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 MAB21L1Q13394 359 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 ALG10BQ5I7T1 473 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 BICRALQ6AI39 1079 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 RTL4Q6ZR62 310 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 SAMD12Q8N8I0 201 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 ADGRL4Q9HBW9 690 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 GALNT9Q9HCQ5 603 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 HAO2Q9NYQ3 351 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 PLCL2Q9UPR0 1127 aa20.39■□□□□ 0.85
CCDC9-201ENST00000221922 KNL1Q8NG31 2342 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 LMO7DNF2Z398 122 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ARHGEF9O43307 516 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 CPNE3O75131 537 aaKnown RBP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 SLC6A6P31641 620 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 CAPZA2P47755 286 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 HNRNPKP61978 463 aaKnown RBP eCLIP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF267Q14586 743 aaPredicted RBP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 FAM27D1Q5T7N8 215 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 TEX19Q8NA77 164 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 OR4N2Q8NGD1 307 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 SLC2A12Q8TD20 617 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 PTCHD1Q96NR3 888 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 CHRNA10Q9GZZ6 450 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 TRAV27A0A087WT01 109 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF749O43361 778 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 RFPL3O75679 317 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 IFNGP01579 166 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 NXPH1P58417 271 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 RPS7P62081 194 aaKnown RBP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 RPL6Q02878 288 aaKnown RBP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ZNF85Q03923 595 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 HACD4Q5VWC8 232 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ARHGAP11AQ6P4F7 1023 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 ULK3Q6PHR2 472 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 OGFOD3Q6PK18 319 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 IL20RBQ6UXL0 311 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 NANOGNBQ7Z5D8 188 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 CEACAM19Q7Z692 300 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 OR51A7Q8NH64 312 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 SHDQ96IW2 340 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 GFM1Q96RP9 751 aaKnown RBP20.38■□□□□ 0.85
CCDC9-201ENST00000221922 RPS6KB2Q9UBS0 482 aa20.38■□□□□ 0.85
CCDC9-201ENST00000221922 THADAQ6YHU6 1953 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 TLCD2A6NGC4 264 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 NPIPB9F8W1W9 429 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 AHCYP23526 432 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 NOS3P29474 1203 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 OR10A3P58181 314 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 GNG2P59768 71 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 NPSR1Q6W5P4 371 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 RCBTB1Q8NDN9 531 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 PGLYRP3Q96LB9 341 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 PELOQ9BRX2 385 aaKnown RBP20.37■□□□□ 0.85
CCDC9-201ENST00000221922 RAB33BQ9H082 229 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 OR51V1Q9H2C8 321 aa20.37■□□□□ 0.85
CCDC9-201ENST00000221922 ERVMER34-1Q9H9K5 563 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms