RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 COPZ2Q9P299 210 aa15.91■□□□□ 0.14
USB1-201ENST00000219281 A0A087WV62 115 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 TRABD2BA6NFA1 517 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 OGG1O15527 345 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 PLRG1O43660 514 aaKnown RBP15.9■□□□□ 0.14
USB1-201ENST00000219281 ADAM11O75078 769 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 RAF1P04049 648 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 TPOP07202 933 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 UGT2B7P16662 529 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 POLR2CP19387 275 aaPredicted RBP15.9■□□□□ 0.14
USB1-201ENST00000219281 GBX2P52951 348 aaPredicted RBP15.9■□□□□ 0.14
USB1-201ENST00000219281 SNTB2Q13425 540 aaKnown RBP15.9■□□□□ 0.14
USB1-201ENST00000219281 FHL1Q13642 323 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 CDK5R1Q15078 307 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 PRICKLE4Q2TBC4 344 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 ARHGAP11AQ6P4F7 1023 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 ABHD13Q7L211 337 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 SMIM19Q96E16 107 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 TMEM168Q9H0V1 697 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 AUNIPQ9H7T9 357 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 C14orf105Q9NVL8 296 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 CAMK2AQ9UQM7 478 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 CA5BQ9Y2D0 317 aa15.9■□□□□ 0.14
USB1-201ENST00000219281 A0A1W2PQF6 199 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 GPR171O14626 319 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 GNB5O14775 395 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 HIST1H1CP16403 213 aaKnown RBP15.89■□□□□ 0.13
USB1-201ENST00000219281 COL9A1P20849 921 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 DRD5P21918 477 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 CAPZA2P47755 286 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 EMDP50402 254 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 CRYZQ08257 329 aaKnown RBP15.89■□□□□ 0.13
USB1-201ENST00000219281 FIGLAQ6QHK4 219 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 BTN2A1Q7KYR7 527 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 CAMKVQ8NCB2 501 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 ZNF671Q8TAW3 534 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 OR14A2Q96R54 314 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 C1QTNF7Q9BXJ2 289 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 HEXA-AS1Q9H8Q6 139 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 UCKL1Q9NWZ5 548 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 MRPL15Q9P015 296 aaKnown RBP15.89■□□□□ 0.13
USB1-201ENST00000219281 ZSCAN5BA6NJL1 495 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 ARL6IP5O75915 188 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 ZNF10P21506 573 aaPredicted RBP15.89■□□□□ 0.13
USB1-201ENST00000219281 NTSR1P30989 418 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 RPS11P62280 158 aaKnown RBP eCLIP15.89■□□□□ 0.13
USB1-201ENST00000219281 PPP2CBP62714 309 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 PPP2CAP67775 309 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 SIRPAP78324 504 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 MGAT2Q10469 447 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 KLF9Q13886 244 aaPredicted RBP15.89■□□□□ 0.13
USB1-201ENST00000219281 LGALS14Q8TCE9 139 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 ZCCHC4Q9H5U6 513 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 GNG8Q9UK08 70 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 FBXL21Q9UKT6 434 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 SPATA2Q9UM82 520 aa15.89■□□□□ 0.13
USB1-201ENST00000219281 PRUNE2Q8WUY3 3088 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 TRBV2A0A0J9YWF9 115 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ZNF593O00488 134 aaPredicted RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 SSNA1O43805 119 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 GPR75O95800 540 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 UCHL1P09936 223 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 EDNRAP25101 427 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 PSMB10P40306 273 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ADPRHP54922 357 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 KIR2DS3Q14952 304 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ALG10BQ5I7T1 473 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 RPLP0P6Q8NHW5 317 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 SNX33Q8WV41 574 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 TSACCQ96A04 125 aaPredicted RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 ORAI1Q96D31 301 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 CNN2Q99439 309 aaKnown RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 GABRG3Q99928 467 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 PDCD1LG2Q9BQ51 273 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 LYRM4Q9HD34 91 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 NKIRAS2Q9NYR9 191 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 PILRAQ9UKJ1 303 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 IER3IP1Q9Y5U9 82 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 H0YGG7 62 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 TNFSF14O43557 240 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 AK1P00568 194 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ADRB1P08588 477 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 OR2T7P0C7T2 308 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 SULT1A3P0DMM9 295 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 SULT1A4P0DMN0 295 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 SSTR2P30874 369 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 NUDT1P36639 197 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 MAP3K8P41279 467 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ACTR1BP42025 376 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ACTR1AP61163 376 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 ARF3P61204 181 aaPredicted RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 CAMK2DQ13557 499 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 LGALSLQ3ZCW2 172 aaPredicted RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 ZCCHC12Q6PEW1 402 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 SLC35F2Q8IXU6 374 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 OR2T27Q8NH04 317 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 DERL3Q96Q80 235 aa15.88■□□□□ 0.13
USB1-201ENST00000219281 C7orf50Q9BRJ6 194 aaKnown RBP15.88■□□□□ 0.13
USB1-201ENST00000219281 DPCDQ9BVM2 203 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms