RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 CPOXP36551 454 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CSNK1A1P48729 337 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 GLO1Q04760 184 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 C3P1Q6ZMU1 363 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CYS1Q717R9 158 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 GLB1L2Q8IW92 636 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SNX18Q96RF0 628 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 KATNB1Q9BVA0 655 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 OBP2BQ9NPH6 170 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 TAPBPO15533 448 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SUSD5O60279 629 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SELENOFO60613 162 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 FCGR2AP12318 317 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 EBPQ15125 230 aaKnown RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CBLL1Q75N03 491 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 NUP98P52948 1817 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 C4AP0C0L4 1744 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 C4BP0C0L5 1744 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 CACNG3O60359 315 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ALPLP05186 524 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ITGAMP11215 1152 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 ERVFC1P60507 584 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 NKX6-1P78426 367 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 HSF5Q4G112 596 aaPredicted RBP12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 RASD2Q96D21 266 aa12.69□□□□□ -0.38
TGFBR3-201ENST00000212355 H0YGG7 62 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 POLR1CO15160 346 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ITGB2P05107 769 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 DAP3P51398 398 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CLDN17P56750 224 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 LGALS14Q8TCE9 139 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 BRIX1Q8TDN6 353 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 GORASP2Q9H8Y8 452 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 PHYHO14832 338 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 GMDSO60547 372 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 SERPINE2P07093 398 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 FAM78AQ5JUQ0 283 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 TSSK4Q6SA08 328 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 SUMF1Q8NBK3 374 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 OR7G2Q8NG99 324 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ASB11Q8WXH4 323 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 MALSU1Q96EH3 234 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ZDHHC7Q9NXF8 308 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 EFCAB7A8K855 629 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 SSX4O60224 188 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 HIST1H1TP22492 207 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ENTHD1Q8IYW4 607 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF808Q8N4W9 903 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ARL11Q969Q4 196 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 MYADMQ96S97 322 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 C20orf24Q9BUV8 137 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 NTMT1Q9BV86 223 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 MDFIC2A0A1B0GVS7 189 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 MAGEB4O15481 346 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 SYPP08247 313 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 NME2P22392 152 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 RBMS1P29558 406 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CSNK1DP48730 415 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CST9LP1Q5W188 147 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CPEB2Q7Z5Q1 589 aaKnown RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 ZFP82Q8N141 532 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 TMEM217Q8N7C4 229 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 P2RY10O00398 339 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 IMPA2O14732 288 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 OIP5O43482 229 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 HOXB9P17482 250 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 RPE65Q16518 533 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 LIN37Q96GY3 246 aaPredicted RBP12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CXorf36Q9H7Y0 433 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 SNX11Q9Y5W9 270 aa12.68□□□□□ -0.38
TGFBR3-201ENST00000212355 CCSO14618 274 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 AK1P00568 194 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 UBE2NLQ5JXB2 153 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 METAP1DQ6UB28 335 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 BPIFB2Q8N4F0 458 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 SIAEQ9HAT2 523 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 NDUFAF4Q9P032 175 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 HSFX1Q9UBD0 423 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CD300LBA8K4G0 201 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 HSD17B6O14756 317 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 DNAJB5O75953 348 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 MSR1P21757 451 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CRABP1P29762 137 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CASP3P42574 277 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CSNK1EP49674 416 aaKnown RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ZNF546Q86UE3 836 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 ADGRF3Q8IZF5 1079 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 OR4K15Q8NH41 348 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 FNDC9Q8TBE3 224 aa12.67□□□□□ -0.38
TGFBR3-201ENST00000212355 CHFRQ96EP1 664 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms