RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 LRRK1Q38SD2 2015 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 DBX1A6NMT0 343 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 WASH3PC4AMC7 463 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 CLN5O75503 358 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 STX11O75558 287 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 LUMP51884 338 aaPredicted RBP13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 RIDAP52758 137 aaKnown RBP13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 CSRP2Q16527 193 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 PRSS53Q2L4Q9 553 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 CLEC12AQ5QGZ9 265 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 OLFML2AQ68BL7 652 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 CXXC5Q7LFL8 322 aaKnown RBP13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 KREMEN2Q8NCW0 462 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 BBS1Q8NFJ9 593 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF480Q8WV37 535 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 ZBP1Q9H171 429 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 REEP4Q9H6H4 257 aa13.73□□□□□ -0.21
TMEM38A-201ENST00000187762 VEGFDO43915 354 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 GPR37L1O60883 481 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 NDUFB6O95139 128 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 CH25HO95992 272 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ATP1B1P05026 303 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF44P15621 663 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ABOP16442 354 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 TYRP1P17643 537 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 XPAP23025 273 aaPredicted RBP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 HSD3B2P26439 372 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 HTR2AP28223 471 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 EIF2S3P41091 472 aaKnown RBP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 PRLHRP49683 370 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 METAP1P53582 386 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SLBPQ14493 270 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 C3orf33Q6P1S2 294 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SLC39A5Q6ZMH5 540 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MMP21Q8N119 569 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 LNX2Q8N448 690 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SIRT6Q8N6T7 355 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 OR2AK2Q8NG84 335 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ABHD4Q8TB40 342 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 STK35Q8TDR2 534 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 CXorf40BQ96DE9 158 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MRGPRX3Q96LB0 322 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF354BQ96LW1 612 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF75AQ96N20 296 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 TREM2Q9NZC2 230 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 PLEKHA6Q9Y2H5 1048 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 WNT6Q9Y6F9 365 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MTCL1Q9Y4B5 1905 aaKnown RBP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 A0A1W2PPE3 182 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 E9PI62 339 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 PHYHO14832 338 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 GSTM3P21266 225 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 PPT1P50897 306 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 HCCSP53701 268 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MAPK14Q16539 360 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 COMMD6Q7Z4G1 85 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 DCUN1D3Q8IWE4 304 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MORN4Q8NDC4 146 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SLC38A5Q8WUX1 472 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 TMEM19Q96HH6 336 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SMAD5Q99717 465 aaKnown RBP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 FNDC11Q9BVV2 318 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 TCF7L1Q9HCS4 588 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 SPHK2Q9NRA0 654 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 KLK11Q9UBX7 282 aa13.72□□□□□ -0.21
TMEM38A-201ENST00000187762 TRAPPC13A5PLN9 417 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 RFPL4AA6NLU0 287 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 RFPL4AL1F8VTS6 287 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 PYCARD-AS1I3L0S3 204 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 KRT33AO76009 404 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ASGR2P07307 311 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ELFN1P0C7U0 828 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ABCD3P28288 659 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 RPS26P62854 115 aaKnown RBP13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 SLC3A1Q07837 685 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 TMEM71Q6P5X7 295 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 LILRA6Q6PI73 481 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 TSSK4Q6SA08 328 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ANKRD33Q7Z3H0 272 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 PXKQ7Z7A4 578 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 CMTM4Q8IZR5 234 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ZSCAN1Q8NBB4 408 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF740Q8NDX6 193 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 OR5D16Q8NGK9 328 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 ZNF296Q8WUU4 475 aaPredicted RBP13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 TMEM185BQ9H7F4 350 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 KLHL9Q9P2J3 617 aa13.71□□□□□ -0.21
TMEM38A-201ENST00000187762 GABARAPH6UMI1 98 aa13.71□□□□□ -0.22
TMEM38A-201ENST00000187762 PCDH8O95206 1070 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms