RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RPS6KB2Q9UBS0 482 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 PCOLCE2Q9UKZ9 415 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 PAK4O96013 591 aaPredicted RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 WASP42768 502 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 GDI2P50395 445 aaKnown RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SNRPNP63162 240 aaKnown RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC22A10Q63ZE4 541 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 DMKNQ6E0U4 476 aaPredicted RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC25A25Q6KCM7 469 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 FIGNL1Q6PIW4 674 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 FGD2Q7Z6J4 655 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 LRRC25Q8N386 305 aaPredicted RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 OR2L3Q8NG85 312 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SUSD6Q92537 303 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 MS4A4EQ96PG1 132 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SDF2Q99470 211 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 PDCD1LG2Q9BQ51 273 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 DEC1Q9P2X7 70 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 ZNF223Q9UK11 482 aaPredicted RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 ACSL5Q9ULC5 683 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 AUP1Q9Y679 476 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 SNRNP200O75643 2136 aaKnown RBP9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 NOTCH4Q99466 2003 aa9.72□□□□□ -0.85
CX3CL1-201ENST00000006053 DOCK9Q9BZ29 2069 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 A0A1W2PPL8 197 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 GNB5O14775 395 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 ARPC1BO15143 372 aaKnown RBP9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 PLATP00750 562 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 ZNF3P17036 446 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 PSMB10P40306 273 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 KLF9Q13886 244 aaPredicted RBP9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 TRMT12Q53H54 448 aaKnown RBP9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 EIPR1Q53HC9 387 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 CMTM4Q8IZR5 234 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 SRFBP1Q8NEF9 429 aaKnown RBP9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 TINAGL1Q9GZM7 467 aaPredicted RBP9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC25A18Q9H1K4 315 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 WDR26Q9H7D7 661 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 INPP5EQ9NRR6 644 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 ABRACLQ9P1F3 81 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 CAMK2AQ9UQM7 478 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 SLC35A3Q9Y2D2 325 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 MED31Q9Y3C7 131 aa9.71□□□□□ -0.85
CX3CL1-201ENST00000006053 ADH1CP00326 375 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TFP02787 698 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 ZNF888P0CJ79 500 aaPredicted RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 NDUFS1P28331 727 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 ARHGDIBP52566 201 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 CLDN12P56749 244 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 EEF1A1P68104 462 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TMEM255AQ5JRV8 349 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TCTE1Q5JU00 501 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 HEPHL1Q6MZM0 1159 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 FAAP20Q6NZ36 180 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 ASPGQ86U10 573 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 SLITRK4Q8IW52 837 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 SDR9C7Q8NEX9 313 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TNFRSF13CQ96RJ3 184 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 GSX2Q9BZM3 304 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 MGAT4CQ9UBM8 478 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 GNG8Q9UK08 70 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 SIGLEC7Q9Y286 467 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 PCDHGA9Q9Y5G4 932 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TBC1D3KA0A087X1G2 549 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TBC1D3BA6NDS4 549 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TBC1D3FA6NER0 549 aaPredicted RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 ZNF860A6NHJ4 632 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 OTOL1A6NHN0 477 aaPredicted RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 C1QTNF3-AMACRE9PGA6 284 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 PSMD9O00233 223 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 MID1O15344 667 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 KHDRBS3O75525 346 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 SC5DO75845 299 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 RGS11O94810 467 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 RRASP10301 218 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 PTHLHP12272 177 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 CD53P19397 219 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 EDNRAP25101 427 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 MAGEB1P43366 347 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 OPCMLQ14982 345 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TBC1D3GQ6DHY5 549 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 FAM98AQ8NCA5 519 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 OR52E2Q8NGJ4 325 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 OR2L8Q8NGY9 312 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 OR4K13Q8NH42 304 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 SNX33Q8WV41 574 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 RBPMSQ93062 196 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 ACTR6Q9GZN1 396 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 HPF1Q9NWY4 346 aa9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 MRPS23Q9Y3D9 190 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 MDC1Q14676 2089 aaKnown RBP9.71□□□□□ -0.86
CX3CL1-201ENST00000006053 TRBV2A0A0J9YWF9 115 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ABHD14A-ACY1A0A1B0GW23 586 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 F8W036 122 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 DNAJB6O75190 326 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 GATBO75879 557 aaKnown RBP9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 ARL6IP5O75915 188 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 SERPINA3P01011 423 aa9.7□□□□□ -0.86
CX3CL1-201ENST00000006053 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms