RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Chrm5Q920H4 532 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Slc19a3Q99PL8 488 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ndufb2Q9CPU2 105 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Tmem186Q9CR76 216 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Tmem179bQ9CY24 219 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Dkk3Q9QUN9 349 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Mocs2Q9Z223 189 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 B4galt2Q9Z2Y2 369 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gtf3c1Q8K284 2101 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Frem2Q6NVD0 3160 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cfap54Q8C6S9 3106 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Heatr5bQ8C547 2070 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Dennd4cA6H8H2 1906 aa6.99□□□□□ -1.29
Trim40-201ENSMUST00000087158 Col4a2P08122 1707 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Zfp433A0A0J9YUD4 600 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gm35315A0A1B0GRI2 571 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gm32687A0A1W2P6H7 600 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 A0A1Y7VIU7 259 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Slc25a43A2A3V2 341 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gpr137cE9Q343 423 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Esp36G3UZD8 160 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Rnf148G3X9R7 316 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gm20696H3BJN7 74 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Vmn2r117K7N6V1 857 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Prss12O08762 761 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Lsm2O35900 95 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cbfa2t3O54972 620 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Nfkbil1O88995 381 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cd14P10810 366 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Nr4a1P12813 601 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Hoxc5P32043 222 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Klk1b26P36369 261 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Btbd3P58545 530 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Rab2bP59279 216 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 SnrpgP62309 76 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Fbxo40P62932 710 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 PtnP63089 168 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Kcnab1P63143 401 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Barhl1P63157 327 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 AdmP97297 184 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 S100a13P97352 98 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Kdm4dQ3U2K5 510 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 CrxosQ3UL53 246 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Elavl4Q61701 385 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 RgmaQ6PCX7 454 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ffar4Q7TMA4 361 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ldoc1Q7TPY9 151 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Slitrk4Q810B8 837 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Sult2a8Q8BGL3 282 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Hs3st3a1Q8BKN6 393 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gm10330Q8BKS1 112 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Clec9aQ8BRU4 238 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ankmy1Q8C0W1 906 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 GatcQ8CBY0 155 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Nedd4lQ8CFI0 1004 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Akr7a2Q8CG76 367 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Mchr1Q8JZL2 353 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gpr1Q8K087 353 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Tm6sf2Q8R1J1 378 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cd177Q8R2S8 817 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ntng1Q8R4G0 539 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cd276Q8VE98 316 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Olfr883Q8VF64 309 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Olfr165Q8VFA2 313 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Olfr474Q8VFC9 310 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Nphs2Q91X05 385 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Slc35a4Q9D321 324 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Q9D4G1 230 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Phf6Q9D4J7 364 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Acad8Q9D7B6 413 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Fam45aQ9D8N2 357 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Lpar3Q9EQ31 354 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cyp2d22Q9JKY7 500 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Znf207Q9JMD0 495 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Plag1Q9QYE0 499 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Actr10Q9QZB7 417 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ubqln2Q9QZM0 638 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Nfkb2Q9WTK5 899 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ppp1r17Q9Z2E4 159 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Tsc22d3Q9Z2S7 137 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cacna1hO88427 2365 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Parp4E9PYK3 1969 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Igkv6-25A0A140T8N7 115 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Spin2-ps6A0A140T8V2 174 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 A0A1W2P799 418 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 A0A286YD17 136 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Gm5072A2AHM1 344 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Sdccag3A2AIW0 432 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Xpnpep2B1AVD1 674 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Ccdc7bE9Q9Y3 381 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Vmn2r109K7N747 858 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Vmn1r16K7N775 303 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Psmd4O35226 376 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 NppaP05125 152 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Sod1P08228 154 aaKnown RBP6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Klrb1cP27814 223 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Rad52P43352 420 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cdh10P70408 788 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Znf488Q5HZG9 337 aa6.98□□□□□ -1.29
Trim40-201ENSMUST00000087158 Cyb5d2Q5SSH8 263 aa6.98□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms