RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Vmn1r68E9Q0V3 319 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Timm8bP62077 83 aaKnown RBP15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Six5P70178 719 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cd47Q61735 303 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 OmgQ63912 440 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Zfp459Q8BZ17 267 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmem200aQ8C817 491 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 HinfpQ8K1K9 503 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hemk1Q921L7 340 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slco1a6Q99J94 670 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cdca5Q9CPY3 264 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rnf138rt1Q9D9M9 248 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn2r88L7N1W8 857 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 NfkbieO54910 364 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 HnrnpkP61979 463 aaKnown RBP15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CtseP70269 397 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Exosc6Q8BTW3 273 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r201Q8R262 300 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Q9CPZ3 230 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 C1galt1Q9JJ06 363 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Nrip3Q9JJR9 240 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 VipP32648 170 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Crebl2Q32M00 123 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Il17rcQ8K4C2 698 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ugt2b37Q8VCN3 530 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc14a1Q8VHL0 384 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ambra1A2AH22 1300 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Msx1P13297 303 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Clvs2Q8BG92 327 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr522Q8VGL1 312 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 EsamQ925F2 394 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pdzd3Q99MJ6 498 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Adamts3E9Q287 1204 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cxcl9P18340 126 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Eif4e1bQ3UTA9 244 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1141Q8VFQ7 311 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Q9CRC3 126 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Abca1P41233 2261 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ndufaf5A2APY7 343 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm10722F6VLK5 217 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 ChrneP20782 493 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Scn11aQ9R053 1765 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn2r98E9PZ56 857 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gcnt7Q3V3K7 433 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1219Q7TR04 311 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Fam69cQ8BQT2 410 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 EogtQ8BYW9 527 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CdnfQ8CC36 187 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tm6sf2Q8R1J1 378 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Desi1Q9CQT7 168 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 AgtrapQ9WVK0 161 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn2r60L7N2A1 853 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kcnab3P97382 249 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Garem1Q3UFT3 876 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Prrc1Q3UPH1 443 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mettl2Q8BMK1 389 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Derl2Q8BNI4 239 aaKnown RBP15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Syt8Q9R0N6 395 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kcnk7Q9Z2T1 307 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 DhrsxQ8VBZ0 335 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Asb18Q8VHA6 467 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ugt2b38Q91WH2 530 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Steap4Q923B6 470 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pbx4Q99NE9 378 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Sp100O35892 482 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr845Q7TRG2 312 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cpt1cQ8BGD5 798 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr410Q8VFX7 315 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr402Q8VFX8 315 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ackr4Q924I3 350 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr588-ps1A0A1B0GSZ2 313 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc1a3P56564 543 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmub2Q3V209 319 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Paqr6Q6TCG5 343 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Itpk1Q8BYN3 419 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gpr37Q9QY42 600 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ckap5A2AGT5 2032 aaKnown RBP15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Fabp2P55050 132 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bri3bpQ8BXV2 253 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pin1Q9QUR7 165 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr576A0A0G2JFH3 312 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rps15P62843 145 aaKnown RBP15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 FrzbP97401 323 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gpr55Q3UJF0 327 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Plk5Q4FZD7 595 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Neu4Q8BZL1 478 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cln8Q9QUK3 288 aa15.63■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Dicer1Q8R418 1916 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rasd1O35626 280 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gja5Q01231 358 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mmp11Q02853 492 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pdss2Q33DR3 401 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Zfp729aQ4QQP3 973 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Q8BN57 294 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr777Q8VFH3 311 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 MrgprhQ99MT8 321 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Asf1bQ9DAP7 202 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Trbv20A0A0B4J1H5 111 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hsbp1l1B2RXB2 72 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Fbxw24E9PXM9 466 aa15.62■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms