RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tspan33Q8R3S2 283 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Eif2b1Q99LC8 305 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 EmcnQ9R0H2 261 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 PlpbpQ9Z2Y8 274 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm11634A0A1B0GSX1 172 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm45711E0CXA2 391 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp54E9PW05 585 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc30a8Q8BGG0 367 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Fam69cQ8BQT2 410 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 FkrpQ8CG64 494 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mrps14Q9CR88 128 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 GmprQ9DCZ1 345 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Adam11Q9R1V4 773 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc23a1Q9Z2J0 605 aa13.17□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr455A0A0B4J1M2 317 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 4930523C07RikE9Q2T4 99 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 RelbQ04863 558 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Secisbp2Q3U1C4 858 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Q8BPC6 396 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Snrnp200Q6P4T2 2136 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Trav15d-1-dv6d-1A0A075B624 124 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp980A2A9J5 645 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mgat4eA6H684 439 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr652B9EHE6 318 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Lim2P56563 173 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ces2fQ08ED5 561 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Amz2Q400C8 359 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 WdcpQ6NV72 663 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mtch1Q791T5 389 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Trim46Q7TNM2 759 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tppp3Q9CRB6 176 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Col1a1P11087 1453 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mrc1Q61830 1456 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nup98Q6PFD9 1816 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm17535J3KMR8 224 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rpp30O88796 268 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Q24JP4 165 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Isg20l2Q3U1G5 368 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn1r40Q9EQ46 310 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Etv4P28322 485 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tmem14aP56983 99 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Lefty2P57785 368 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 JupQ02257 745 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Prelid2Q0VBB0 177 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc25a41Q8BVN7 312 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1284Q8VF29 311 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 2210010C04RikQ9CPN9 247 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ndufb2Q9CPU2 105 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn2r91E9Q2U5 856 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ptger1P35375 405 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gpr15Q0VDU3 360 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Fa2hQ5MPP0 372 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 CrhbpQ60571 322 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Lacc1Q8BZT9 430 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Taf9Q8VI33 264 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Rnf141Q99MB7 230 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Bbc3Q99ML1 193 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 PirQ9D711 290 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gpr37Q9QY42 600 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Btbd35f16A0A087WSN2 498 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr566A0A1B0GST0 319 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 CerklA2AQH1 525 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 AlyrefO08583 255 aaKnown RBP13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Map3k8Q07174 467 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1115Q7TR53 326 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zdhhc14Q8BQQ1 489 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Fut2Q9JL27 347 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Abhd1Q9QZC8 412 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Dvl1P51141 695 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nup43P59235 380 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Riiad1Q3KNY5 119 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pgap2Q3TQR0 254 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp729aQ4QQP3 973 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gal3st2Q6XQH0 394 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1162Q7TR28 314 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 1700001K19RikQ80ZT1 219 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Adgrg3Q8R0T6 542 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn1r231Q8R2A3 311 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr338Q8VGK6 306 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Bcl7bQ921K9 202 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 WacQ924H7 646 aa13.16□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr896-ps1A0A1L1SRZ8 308 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 9230113P08RikD3YWX3 137 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn1r77E9PY60 306 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Enthd1E9Q1Z2 618 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vmn2r8L7N472 848 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm26965M0QWH4 86 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gjd2O54851 321 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cib3Q0P523 160 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pabpc2Q62029 628 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Q8C4P0 716 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Unc5dQ8K1S2 956 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp87Q8K2A4 540 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1163Q8VFR4 316 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Washc3Q9CR27 194 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Il1bP10749 269 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ccr7P47774 378 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Hist1h3bP84228 136 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Bdh1Q80XN0 343 aa13.15□□□□□ -0.3
Col5a1-201ENSMUST00000028280 GnsQ8BFR4 544 aa13.15□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms