RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 EXTL1Q92935 676 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 RIT1Q92963 219 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 TMEM80Q96HE8 168 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 VSTM2LQ96N03 204 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 AGAP4Q96P64 663 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 LMF1Q96S06 567 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 PRSS27Q9BQR3 290 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 FOLH1BQ9HBA9 442 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 KRCC1Q9NPI7 259 aaPredicted RBP9.4□□□□□ -0.9
PHGDH-224ENST00000641711 CTPS2Q9NRF8 586 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 PNO1Q9NRX1 252 aaKnown RBP9.4□□□□□ -0.9
PHGDH-224ENST00000641711 MED17Q9NVC6 651 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 IL20Q9NYY1 176 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 ABI3Q9P2A4 366 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 TESQ9UGI8 421 aaKnown RBP9.4□□□□□ -0.9
PHGDH-224ENST00000641711 KCNE5Q9UJ90 142 aa9.4□□□□□ -0.9
PHGDH-224ENST00000641711 TNRC6AQ8NDV7 1962 aaKnown RBP9.4□□□□□ -0.9
PHGDH-224ENST00000641711 CHD6Q8TD26 2715 aa9.4□□□□□ -0.91
PHGDH-224ENST00000641711 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 GXYLT2A0PJZ3 443 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 OR2W5A6NFC9 320 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 SNTNA6NMZ2 147 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 EFCAB9A8MZ26 197 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 KDM4EB2RXH2 506 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 NPIPB9F8W1W9 429 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 M0R3G1 203 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ATXN7O15265 892 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 AIREO43918 545 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DDAH2O95865 285 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ADRA2AP08913 450 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DBTP11182 482 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DRD5P21918 477 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 NR4A1P22736 598 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 CALRP27797 417 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 HTR2AP28223 471 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 SERPINB10P48595 397 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 RGS6P49758 472 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 BMXP51813 675 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 PGDP52209 483 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 MLLT10P55197 1068 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 PSG6Q00889 435 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 Q0VFX4 171 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNHIT3Q15649 155 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF141Q15928 474 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM44Q2T9K0 475 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 LINC00303Q3SY05 128 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 SYT14P1Q58G82 188 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ARMCX4Q5H9R4 360 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 MRPL2Q5T653 305 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF613Q6PF04 617 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 IGFL2Q6UWQ7 119 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DND1Q8IYX4 353 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 IQCF1Q8N6M8 205 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 C17orf47Q8NEP4 570 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 OR5L2Q8NGL0 311 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 OR8D4Q8NGM9 314 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 NDNFQ8TB73 568 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 TMEM163Q8TC26 289 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 SLC2A12Q8TD20 617 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 OIT3Q8WWZ8 545 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 THOC3Q96J01 351 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF582Q96NG8 517 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 SLC38A2Q96QD8 506 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF559Q9BR84 538 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 TSSK6Q9BXA6 273 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DEFB126Q9BYW3 111 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 PLA2G12AQ9BZM1 189 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 FGF20Q9NP95 211 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 FBXO34Q9NWN3 711 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 TVP23BQ9NYZ1 205 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DNAJC27Q9NZQ0 273 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 OSGIN1Q9UJX0 560 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 DIMT1Q9UNQ2 313 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 LSM2Q9Y333 95 aaKnown RBP9.39□□□□□ -0.91
PHGDH-224ENST00000641711 CDH10Q9Y6N8 788 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 A3GALT2U3KPV4 340 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 LAMA5O15230 3695 aa9.39□□□□□ -0.91
PHGDH-224ENST00000641711 EXPH5Q8NEV8 1989 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 IGHV3-20A0A0C4DH32 117 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PRODHO43272 600 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PRAMEF2O60811 474 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ZFAND5O76080 213 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 HMGN1P05114 100 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 ENDOUP21128 410 aaKnown RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 CCL11P51671 97 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 GAS1P54826 345 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 PSMD4P55036 377 aaKnown RBP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 VBP1P61758 197 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 DCAF7P61962 342 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 NCS1P62166 190 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 HOXC5Q00444 222 aa9.38□□□□□ -0.91
PHGDH-224ENST00000641711 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.38□□□□□ -0.91
PHGDH-224ENST00000641711 MFAP5Q13361 173 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms