RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ITPKBP27987 946 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 LCN1P31025 176 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 ACAA2P42765 397 aaKnown RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 RPS3AP61247 264 aaKnown RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 VBP1P61758 197 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 NCS1P62166 190 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 RPS18P62269 152 aaKnown RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PSPHP78330 225 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 LSM11P83369 360 aaKnown RBP eCLIP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 TSPAN31Q12999 210 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 EFR3AQ14156 821 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PCOLCEQ15113 449 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 INAQ16352 499 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 KIRREL2Q6UWL6 708 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 CASP12Q6UXS9 341 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PLEKHG7Q6ZR37 379 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PTCHD4Q6ZW05 846 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 TIPARPQ7Z3E1 657 aaKnown RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PIP4P1Q86T03 277 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 MARCH3Q86UD3 253 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF441Q8N8Z8 693 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 C17orf47Q8NEP4 570 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 NUBPLQ8TB37 319 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 TEX47Q8TBZ9 253 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 SLC22A8Q8TCC7 542 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 CHAC2Q8WUX2 184 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 OIT3Q8WWZ8 545 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 UBE2FQ969M7 185 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 RHNO1Q9BSD3 238 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 MND1Q9BWT6 205 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 PRRG3Q9BZD7 231 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 FOXJ2Q9P0K8 574 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 DAPK2Q9UIK4 370 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 ITGB1BP2Q9UKP3 347 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 LSM2Q9Y333 95 aaKnown RBP8.11□□□□□ -1.11
PHGDH-219ENST00000641513 MED31Q9Y3C7 131 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 DOCK10Q96BY6 2186 aa8.11□□□□□ -1.11
PHGDH-219ENST00000641513 GPR179Q6PRD1 2367 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 hCG_2014768A0A024R1R8 64 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 LOC102723996A0A087X1L8 192 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 IGHV1-45A0A0A0MS14 117 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 NSG1A0A0A6YYJ2 146 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 A0A0B4J2E0 115 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 A0A1B0GX12 115 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 UNC119BA6NIH7 251 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 OR6C70A6NIJ9 312 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ELOA3DA6NLF2 546 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 M0R129 80 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 HCRTR2O43614 444 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 CHP2O43745 196 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 KLF7O75840 302 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 UPK1BO75841 260 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 DLGAP3O95886 979 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 STSP08842 583 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 COX6A1P12074 109 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 GADD45AP24522 165 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 EVI2BP34910 448 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 SOX6P35712 828 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 DLSTP36957 453 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 NBL1P41271 181 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 STAT5AP42229 794 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 OMPP47874 163 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 SLC6A8P48029 635 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 FBXW4P57775 412 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PLAURQ03405 335 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ITGADQ13349 1161 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 GINS1Q14691 196 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 CD226Q15762 336 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 EXT1Q16394 746 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ELOA3BQ3SY89 546 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ARMCX4Q5H9R4 360 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ULK3Q6PHR2 472 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 APOOLQ6UXV4 268 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 WDR88Q6ZMY6 472 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 GLRX5Q86SX6 157 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ATCAYQ86WG3 371 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 RNF113BQ8IZP6 322 aaKnown RBP8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ESX1Q8N693 406 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 IQCF1Q8N6M8 205 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PROKR2Q8NFJ6 384 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ELOA3Q8NG57 546 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 OR8K3Q8NH51 312 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PFN4Q8NHR9 129 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 SLC35B4Q969S0 331 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 TMCO6Q96DC7 493 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 HS6ST2Q96MM7 605 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 WDFY2Q96P53 400 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 PRSS27Q9BQR3 290 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 CCDC32Q9BV29 185 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 TEX12Q9BXU0 123 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 DPH1Q9BZG8 443 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 LAT2Q9GZY6 243 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF700Q9H0M5 742 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 EGLN3Q9H6Z9 239 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 RHBDL2Q9NX52 303 aa8.1□□□□□ -1.11
PHGDH-219ENST00000641513 CHCHD3Q9NX63 227 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms