RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 BARX1Q9HBU1 254 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ATP13A2Q9NQ11 1180 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SLC35D1Q9NTN3 355 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 EXD2Q9NVH0 621 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 RLIMQ9NVW2 624 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ZNF223Q9UK11 482 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 LIPT1Q9Y234 373 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CFL2Q9Y281 166 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CACNA1AO00555 2505 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 TMEM247A6NEH6 219 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GAGE10A6NGK3 116 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 AQP7P3A6NL99 342 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 OR6C76A6NM76 312 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SLC28A2O43868 658 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SOX30O94993 753 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CHRM4P08173 479 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CT45A8P0DMV1 189 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CT45A9P0DMV2 189 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CDH2P19022 906 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SPINK2P20155 84 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 KDELR2P33947 212 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GABRA3P34903 492 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 PTDSS1P48651 473 aaKnown RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 RPS6KA3P51812 740 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 LUMP51884 338 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CRYBA2P53672 197 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GMFBP60983 142 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GNA13Q14344 377 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CT45A2Q5DJT8 189 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ATAD3BQ5T9A4 648 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 NPSR1Q6W5P4 371 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 C1orf229Q6ZS94 237 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 C16orf62Q7Z3J2 963 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GALNT10Q86SR1 603 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ADCK1Q86TW2 530 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 COX18Q8N8Q8 333 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CHDHQ8NE62 594 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 OR52E4Q8NGH9 312 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GPR151Q8TDV0 419 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 PIK3R3Q92569 461 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ADIPOR1Q96A54 375 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 KIAA1143Q96AT1 154 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 NSMCE2Q96MF7 247 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 TRNT1Q96Q11 434 aaKnown RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SCNM1Q9BWG6 230 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 BTBD2Q9BX70 525 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 C11orf54Q9H0W9 315 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 SLC25A32Q9H2D1 315 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 GPN2Q9H9Y4 310 aaPredicted RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 IL17BQ9UHF5 180 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 ANGPT4Q9Y264 503 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 MRPS18BQ9Y676 258 aaKnown RBP7.31□□□□□ -1.24
SCARB2-220ENST00000640076 NCOR2Q9Y618 2525 aa7.31□□□□□ -1.24
SCARB2-220ENST00000640076 CNTRLQ7Z7A1 2325 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 FRYQ5TBA9 3013 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 TRBV11-1A0A0K0K1C0 115 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 C2orf92A0A1B0GVN3 265 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 TCRBV3S1A0A5B6 114 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 GXYLT2A0PJZ3 443 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 C5orf58C9J3I9 102 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 PSMD9O00233 223 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 PRKNO60260 465 aaPredicted RBP7.3□□□□□ -1.24
SCARB2-220ENST00000640076 SEC14L2O76054 403 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 H6PDO95479 791 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 AK1P00568 194 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 C8BP07358 591 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 DRD5P21918 477 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 TRHRP34981 398 aaPredicted RBP7.3□□□□□ -1.24
SCARB2-220ENST00000640076 PPICP45877 212 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 CAMLGP49069 296 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 CRISP3P54108 245 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 CDH15P55291 814 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 ARPC4P59998 168 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 EXT1Q16394 746 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 NNATQ16517 81 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 ARHGAP11BQ3KRB8 267 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 GPAT3Q53EU6 434 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 LRRC23Q53EV4 343 aaPredicted RBP7.3□□□□□ -1.24
SCARB2-220ENST00000640076 MTX3Q5HYI7 312 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 CCNJQ5T5M9 372 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 PRAMEF8Q5VWM4 474 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 PRAMEF7Q5VXH5 474 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 HSDL2Q6YN16 418 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 NDUFAF7Q7L592 441 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 SLC29A4Q7RTT9 530 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 OLIG3Q7RTU3 272 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 MRGPREQ86SM8 312 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 GRAMD2AQ8IUY3 354 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 AQP12AQ8IXF9 295 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 ZNF441Q8N8Z8 693 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 OR4N2Q8NGD1 307 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 SETD6Q8TBK2 473 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 FAM122AQ96E09 287 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 GAL3ST4Q96RP7 486 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 SDF2Q99470 211 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 WWTR1Q9GZV5 400 aa7.3□□□□□ -1.24
SCARB2-220ENST00000640076 NXF5Q9H1B4 397 aaKnown RBP7.3□□□□□ -1.24
SCARB2-220ENST00000640076 SLC38A1Q9H2H9 487 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms