RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 SHCBP1LQ9BZQ2 653 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DPEP2Q9H4A9 486 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DEC1Q9P2X7 70 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DCDC2Q9UHG0 476 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF229Q9UJW7 825 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 KLK13Q9UKR3 277 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 A0A087WWV3 80 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 GRID2IPA4D2P6 1211 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 LINC00473A8K010 186 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 H3BMH7 237 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 MID1O15344 667 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 SRPX2O60687 465 aaPredicted RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 SCELO95171 688 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 TNNC2P02585 160 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 ITGB2P05107 769 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 H2AFB1P0C5Y9 115 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 H2AFB2P0C5Z0 115 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 ARSBP15848 533 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 POLR2CP19387 275 aaPredicted RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 BCKDHBP21953 392 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 GPX3P22352 226 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 STOMP27105 288 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 TACR3P29371 465 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 KCNJ3P48549 501 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 STX17P56962 302 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 SNRPFP62306 86 aaKnown RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 CSNK1G2P78368 415 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 ZNF33AQ06730 810 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 OR1C1Q15619 314 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 FAM171BQ6P995 826 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 C17orf107Q6ZR85 190 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 GPRIN3Q6ZVF9 776 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 GPBP1Q86WP2 473 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 PTOV1Q86YD1 416 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 CDKL3Q8IVW4 592 aaPredicted RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 UBA3Q8TBC4 463 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 PKMYT1Q99640 499 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 GOLPH3Q9H4A6 298 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 AAMDCQ9H7C9 122 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 LSM7Q9UK45 103 aaKnown RBP6.52□□□□□ -1.37
NECAP1-220ENST00000639841 PTPRDP23468 1912 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 ANAPC1Q9H1A4 1944 aa6.52□□□□□ -1.37
NECAP1-220ENST00000639841 NPEPPSL1A6NEC2 478 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 FRG2CA6NGY1 282 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 YJEFN3A6XGL0 299 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 H3BTX0 84 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 GOLGA8RI6L899 631 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 GAPDHSO14556 408 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 SIVA1O15304 175 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TSPAN2O60636 221 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CHRM5P08912 532 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 HOXB2P14652 356 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 WARSP23381 471 aaKnown RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 PSMB6P28072 239 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 IL12BP29460 328 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TNFSF9P41273 254 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 FOLR3P41439 243 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ART3Q13508 389 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CEACAM7Q14002 265 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 PAPPA-AS1Q5QFB9 102 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OR52W1Q6IF63 320 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TMIGD1Q6UXZ0 262 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 COX8CQ7Z4L0 72 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TMEM139Q8IV31 216 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 PRSS35Q8N3Z0 413 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 MLKLQ8NB16 471 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 FAM110BQ8TC76 370 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 EME1Q96AY2 570 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 NXPE2Q96DL1 559 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 BPIFA2Q96DR5 249 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 GABRG3Q99928 467 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 SYT15Q9BQS2 421 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 PLEK2Q9NYT0 353 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TIMM10BQ9Y5J6 103 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 IGF2RP11717 2491 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CEP192Q8TEP8 1941 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 SPAARA0A1B0GVQ0 90 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 A0A1W2PRB8 838 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 C1QTNF3-AMACRE9PGA6 284 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 NDUFS7O75251 213 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OR2J3O76001 311 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OAS1P00973 400 aaKnown RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 MT-ND2P03891 347 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 UQCRBP14927 111 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 SFTPDP35247 375 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 MATKP42679 507 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OR3A3P47888 321 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CLDN17P56750 224 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ERVK-8P63133 956 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 PMS2P3Q13401 168 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OTUD3Q5T2D3 398 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 DPY19L2P2Q6ZN68 376 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 VPS36Q86VN1 386 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 CACUL1Q86Y37 369 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 TEX26Q8N6G2 289 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ZNF781Q8N8C0 355 aa6.51□□□□□ -1.37
NECAP1-220ENST00000639841 ZNF557Q8N988 423 aaPredicted RBP6.51□□□□□ -1.37
NECAP1-220ENST00000639841 OR4D6Q8NGJ1 314 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms