RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 PTPMT1Q8WUK0 201 aaPredicted RBP12.71□□□□□ -0.38
ATRIP-208ENST00000639561 TEX12Q9BXU0 123 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 EXOSC4Q9NPD3 245 aaKnown RBP12.71□□□□□ -0.38
ATRIP-208ENST00000639561 SIGLEC7Q9Y286 467 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.38
ATRIP-208ENST00000639561 TRAV27A0A087WT01 109 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 C17orf105B2RV13 164 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SOCS6O14544 535 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ATXN7O15265 892 aaPredicted RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 LRRTM2O43300 516 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SAGP10523 405 aaPredicted RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ATP12AP54707 1039 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 CTBP2P56545 445 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 CLN3Q13286 438 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 NXNL2Q5VZ03 156 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 TMPRSS9Q7Z410 1059 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 CPOQ8IVL8 374 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 LSMEM1Q8N8F7 131 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ZNF485Q8NCK3 441 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 TSLPQ969D9 159 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 RFKQ969G6 155 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SENP5Q96HI0 755 aaPredicted RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 CCDC74BQ96LY2 380 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 NUDT22Q9BRQ3 303 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 G6PC3Q9BUM1 346 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SEC14L4Q9UDX3 406 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 IGHV5-10-1A0A0J9YXX1 117 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 HMGN1P05114 100 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 FOLR1P15328 257 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 PSMA1P25786 263 aaKnown RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 HTR1FP30939 366 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 RGS21Q2M5E4 152 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ALG10BQ5I7T1 473 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SLC35F1Q5T1Q4 408 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 KIRREL2Q6UWL6 708 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 B3GLCTQ6Y288 498 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 LNX2Q8N448 690 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 OR52L1Q8NGH7 329 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 SNRNP27Q8WVK2 155 aaKnown RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 GATAD2BQ8WXI9 593 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 YIPF2Q9BWQ6 316 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 HCAR1Q9BXC0 346 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 STUB1Q9UNE7 303 aa12.7□□□□□ -0.38
ATRIP-208ENST00000639561 YARS2Q9Y2Z4 477 aaKnown RBP12.7□□□□□ -0.38
ATRIP-208ENST00000639561 PNMA8CA0A1B0GUJ8 204 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 A8MU76 341 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 LIPCP11150 499 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CPEP16870 476 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 GALNSP34059 522 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 SLC1A3P43003 542 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 PLBD1Q6P4A8 553 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 OR51A7Q8NH64 312 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 EFHD2Q96C19 240 aaPredicted RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 TRIM2Q9C040 744 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 MED20Q9H944 212 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CPNE5Q9HCH3 593 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 FAIMQ9NVQ4 179 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 QPCTLQ9NXS2 382 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 TMEM5Q9Y2B1 443 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 EXOSC1Q9Y3B2 195 aaKnown RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 MN1Q10571 1320 aaPredicted RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 IGKV3D-11A0A0A0MRZ8 115 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 ZC3H12DA2A288 527 aaKnown RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 LALBAP00709 142 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 BMP7P18075 431 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 PSMD7P51665 324 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 SLC37A1P57057 533 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 FHL1Q13642 323 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 ARHGAP40Q5TG30 622 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 LINC00114Q6XXX2 140 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 PLXDC1Q8IUK5 500 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 D2HGDHQ8N465 521 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 SIRT6Q8N6T7 355 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 TMEM203Q969S6 136 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 OTULINQ96BN8 352 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CLIP3Q96DZ5 547 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 BBC3Q96PG8 261 aaPredicted RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 CCNL2Q96S94 520 aaPredicted RBP12.69□□□□□ -0.38
ATRIP-208ENST00000639561 ASPNQ9BXN1 380 aa12.69□□□□□ -0.38
ATRIP-208ENST00000639561 EVA1AQ9H8M9 152 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms