RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 SLIT1O75093 1534 aa4.36□□□□□ -1.71
FAM49B-230ENST00000639004 CPS1P31327 1500 aa4.36□□□□□ -1.71
FAM49B-230ENST00000639004 SYNJ2BP-COX16A0A087WUM0 186 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 SMIM28A0A1B0GU29 152 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 NDC80O14777 642 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 XPO1O14980 1071 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 HDAC3O15379 428 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 BCAS1O75363 584 aaPredicted RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 ZNF19P17023 458 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 PSMB1P20618 241 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 ATP6V1C1P21283 382 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 CD80P33681 288 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 KIR2DS2P43631 304 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 RPS8P62241 208 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 LRRC74AQ0VAA2 488 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 AANATQ16613 207 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 TATDN3Q17R31 274 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 NADK2Q4G0N4 442 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 HSP90AB3PQ58FF7 597 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 PYHIN1Q6K0P9 492 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 CES3Q6UWW8 571 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 NBPF5PQ86XG9 351 aaPredicted RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 OR51G2Q8NGK0 314 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 OR5L2Q8NGL0 311 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 RPL3LQ92901 407 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 FGGYQ96C11 551 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 ZNF184Q99676 751 aaPredicted RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 CHIAQ9BZP6 476 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 NMUR2Q9GZQ4 415 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 GLIPR2Q9H4G4 154 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 EHD1Q9H4M9 534 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 FANCFQ9NPI8 374 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 IL17CQ9P0M4 197 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 ZNF221Q9UK13 617 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 BLOC1S6Q9UL45 172 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 RRP15Q9Y3B9 282 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 OR10H1Q9Y4A9 318 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 MAB21L2Q9Y586 359 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 FRMPD4Q14CM0 1322 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 NINLQ9Y2I6 1382 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 CPSF1Q10570 1443 aaKnown RBP4.35□□□□□ -1.71
FAM49B-230ENST00000639004 PPIP5K1Q6PFW1 1433 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 UBR1Q8IWV7 1749 aa4.35□□□□□ -1.71
FAM49B-230ENST00000639004 A8MU10 97 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 MSH4O15457 936 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 TBX19O60806 448 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 LYPLA1O75608 230 aaPredicted RBP4.34□□□□□ -1.71
FAM49B-230ENST00000639004 SEMG1P04279 462 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 HNRNPA2B1P22626 353 aaKnown RBP4.34□□□□□ -1.71
FAM49B-230ENST00000639004 HPCAL1P37235 193 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 LYZP61626 148 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 HMGN5P82970 282 aaKnown RBP4.34□□□□□ -1.71
FAM49B-230ENST00000639004 SELPLGQ14242 412 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 LRRC36Q1X8D7 754 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 FAM71F2Q6NXP2 309 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 C16orf62Q7Z3J2 963 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 EGFL6Q8IUX8 553 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 SKA3Q8IX90 412 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 CLDN19Q8N6F1 224 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 OR10H4Q8NGA5 316 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 IL4I1Q96RQ9 567 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 RIT2Q99578 217 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 ALG12Q9BV10 488 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 TEX13BQ9BXU2 312 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 TMEM117Q9H0C3 514 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 ELOVL3Q9HB03 270 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 AIPL1Q9NZN9 384 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 CTNNA3Q9UI47 895 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 ABCG2Q9UNQ0 655 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 WDR45Q9Y484 360 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 ALG6Q9Y672 507 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 NSD2O96028 1365 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 ATP7BP35670 1465 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 C3P01024 1663 aa4.34□□□□□ -1.71
FAM49B-230ENST00000639004 USP32Q8NFA0 1604 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 NKTRP30414 1462 aaKnown RBP4.33□□□□□ -1.72
FAM49B-230ENST00000639004 IQSEC2Q5JU85 1478 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 SSH2Q76I76 1423 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 PNPLA6Q8IY17 1366 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 A0A1W2PNV4 684 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 TMEM110-MUSTN1A8MSY1 372 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 FAM25EA8MYX2 175 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 TBL1XO60907 577 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 OR8U8P0C7N1 319 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 UQCRC2P22695 453 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 NMT1P30419 496 aaKnown RBP4.33□□□□□ -1.72
FAM49B-230ENST00000639004 SLC26A2P50443 739 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 AP3M2P53677 418 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
FAM49B-230ENST00000639004 EGFEM1PQ0D2K5 195 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 CUL1Q13616 776 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 ZNF79Q15937 498 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 PDK4Q16654 411 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 TPD52L1Q16890 204 aaPredicted RBP4.33□□□□□ -1.72
FAM49B-230ENST00000639004 GGTA1PQ4G0N0 100 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 LIPNQ5VXI9 398 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 ACOT1Q86TX2 421 aa4.33□□□□□ -1.72
FAM49B-230ENST00000639004 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
FAM49B-230ENST00000639004 B3GALT6Q96L58 329 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms