RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 WDR5BQ86VZ2 330 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CHDHQ8NE62 594 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 OR4M1Q8NGD0 313 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 FNDC8Q8TC99 324 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 EBF4Q9BQW3 602 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 DPCDQ9BVM2 203 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 EGLN3Q9H6Z9 239 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SPHK1Q9NYA1 384 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SLC17A6Q9P2U8 582 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TTC3P53804 2025 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 LMO7Q8WWI1 1683 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 H3BMQ9 156 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ABCD4O14678 606 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 KIAA0513O60268 411 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 PRAMEF4O60810 478 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CLDN1O95832 211 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HLA-HP01893 362 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NFYBP25208 207 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 DCTP40126 519 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 RPS26P62854 115 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ATP6AP1Q15904 470 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TAZQ16635 292 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HIST2H3PS2Q5TEC6 136 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HACD4Q5VWC8 232 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NPSR1Q6W5P4 371 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 AAED1Q7RTV5 226 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 VGLL2Q8N8G2 317 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 FIBINQ8TAL6 211 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 DOK4Q8TEW6 326 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SLC41A2Q96JW4 573 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CNTNAP3Q9BZ76 1288 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 APOBEC3GQ9HC16 384 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF334Q9HCZ1 680 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SLC9B1P1A6NJY1 282 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 GJB5O95377 273 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 AADACP22760 399 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 ITGB7P26010 798 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 STT3AP46977 705 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MRPS34P82930 218 aaKnown RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MOGSQ13724 837 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 MBTPS1Q14703 1052 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CTC1Q2NKJ3 1217 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 VASNQ6EMK4 673 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NLRC3Q7RTR2 1065 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 NRMQ8IXM6 262 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 GIMAP1Q8WWP7 306 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 FBXL20Q96IG2 436 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 HRASLS5Q96KN8 279 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SLC6A18Q96N87 628 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 IL17FQ96PD4 163 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 SMOQ99835 787 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CACNG6Q9BXT2 260 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 PITHD1Q9GZP4 211 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM165Q9HC07 324 aa5.21□□□□□ -1.58
SCN1A-209ENST00000635750 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN1A-209ENST00000635750 CDHR4A6H8M9 788 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ABHD16AO95870 558 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 BIDP55957 195 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 MC2RQ01718 297 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 DOC2AQ14183 400 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NADK2Q4G0N4 442 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 C5orf46Q6UWT4 87 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 LINC00696Q6ZRV3 163 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TMEM130Q8N3G9 435 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HYLS1Q96M11 299 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ADOQ96SZ5 270 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FUNDC2Q9BWH2 189 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IL25Q9H293 177 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HHLA2Q9UM44 414 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ASB4Q9Y574 426 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SLIT2O94813 1529 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SERTM2A0A1B0GWG4 89 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PRSS38A1L453 326 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FAM171A2A8MVW0 826 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EEDO75530 441 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OR7C1O76099 320 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ARHGEF15O94989 841 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SPDEFO95238 335 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 VNN1O95497 513 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EGFP01133 1207 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RPS5P46782 204 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PMPCAQ10713 525 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EXT1Q16394 746 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 HBMQ6B0K9 141 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 FCRLBQ6BAA4 426 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 SYT13Q7L8C5 426 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 BTLAQ7Z6A9 289 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EGFL6Q8IUX8 553 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NHLRC2Q8NBF2 726 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 C11orf40Q8WZ69 217 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 IP6K3Q96PC2 410 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RANBP9Q96S59 729 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 TCEAL7Q9BRU2 100 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 NUBP2Q9Y5Y2 271 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 ADGRB1O14514 1584 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 PMS2P1A4D2B8 440 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EIF3FO00303 357 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 OIP5O43482 229 aa5.2□□□□□ -1.58
SCN1A-209ENST00000635750 EIF1BO60739 113 aaKnown RBP5.2□□□□□ -1.58
SCN1A-209ENST00000635750 RASAL1O95294 804 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms