RNA–Protein interactions for RNA: ENST00000631043.2

TCF4-275, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-275	ENST00000631043	BTN3A3	O00478	584 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	HMGN4	O00479	90 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	FAAH	O00519	579 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PEX12	O00623	359 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PCDH17	O14917	1159 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SLC31A1	O15431	190 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	LRRTM2	O43300	516 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	FAM20B	O75063	409 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CCNB2	O95067	398 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	LY86	O95711	162 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SEMA4F	O95754	770 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ADA	P00813	363 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SERPIND1	P05546	499 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	HTR1A	P08908	422 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SLC35G6	P0C7Q6	338 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	F3	P13726	295 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GABRG2	P18507	467 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	AGA	P20933	346 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CBL	P22681	906 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ATP5A1	P25705	553 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GGT2	P36268	569 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CHRNA7	P36544	502 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	NUDT1	P36639	197 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ETV5	P41161	510 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ACTR1B	P42025	376 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	KIR2DL3	P43628	341 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CDKN1B	P46527	198 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CLK3	P49761	638 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TPMT	P51580	245 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	NCBP2	P52298	156 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PLA2G16	P53816	162 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	RRAD	P55042	308 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TMBIM6	P55061	237 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CDH12	P55289	794 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CLDN2	P57739	230 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CXCR4	P61073	352 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	HGFAC	Q04756	655 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ILF3	Q12906	894 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PPP1R8	Q12972	351 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SLC13A2	Q13183	592 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PMS2P3	Q13401	168 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TP53BP2	Q13625	1128 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SGCB	Q16585	318 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TBR1	Q16650	682 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	MEP1A	Q16819	746 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	EXOC3L2	Q2M3D2	409 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	BTBD16	Q32M84	506 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GAGE13	Q4V321	117 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GPAT3	Q53EU6	434 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TPRG1L	Q5T0D9	272 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	XAF1	Q6GPH4	301 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	OR4C11	Q6IEV9	310 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	LAIR2	Q6ISS4	152 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	BHLHB9	Q6PI77	547 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ENPP7	Q6UWV6	458 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	VN1R4	Q7Z5H5	301 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TSEN54	Q7Z6J9	526 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ABI3BP	Q7Z7G0	1075 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ASPG	Q86U10	573 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	BIVM	Q86UB2	503 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CYP4Z1	Q86W10	505 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	AMIGO1	Q86WK6	493 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	NRROS	Q86YC3	692 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	LDLRAD3	Q86YD5	345 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ZNF573	Q86YE8	665 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PLD3	Q8IV08	490 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ERI1	Q8IV48	349 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TDH	Q8IZJ6	230 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TTC29	Q8NA56	475 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CAMKV	Q8NCB2	501 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SLC24A4	Q8NFF2	622 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	OR52J3	Q8NH60	311 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	IL17D	Q8TAD2	202 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SUN3	Q8TAQ9	357 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CNIH3	Q8TBE1	160 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	POC1B	Q8TC44	478 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GIPC3	Q8TF64	312 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	RAB2B	Q8WUD1	216 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	LIPH	Q8WWY8	451 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PROX1	Q92786	737 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	KAT2A	Q92830	837 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	C12orf43	Q96C57	262 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TMCO6	Q96DC7	493 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	C5orf30	Q96GV9	206 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	AMDHD1	Q96NU7	426 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	OR14A2	Q96R54	314 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	BBS4	Q96RK4	519 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GSDMC	Q9BYG8	508 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	RTN4R	Q9BZR6	473 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SLC26A1	Q9H2B4	701 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	NELFA	Q9H3P2	528 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	GLIPR2	Q9H4G4	154 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	CXorf21	Q9HAI6	301 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	TREM1	Q9NP99	234 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	HEYL	Q9NQ87	328 aa	Predicted RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	DDX28	Q9NUL7	540 aa	Known RBP	4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	POT1	Q9NUX5	634 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	PARPBP	Q9NWS1	579 aa		4.26	□□□□□ -1.73
TCF4-275	ENST00000631043	SPHK1	Q9NYA1	384 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms