RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 VRK2Q86Y07 508 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 CENPSQ8N2Z9 138 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR4D11Q8NGI4 311 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 PSMA8Q8TAA3 256 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF675Q8TD23 568 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 PTPMT1Q8WUK0 201 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 DHRS1Q96LJ7 313 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 BOKQ9UMX3 212 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 EML5Q05BV3 1969 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 IFNGP01579 166 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 UBL4AP11441 157 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC22A11Q9NSA0 550 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 MYOTQ9UBF9 498 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 MSRB2Q9Y3D2 182 aa11.44□□□□□ -0.58
SYNGAP1-207ENST00000628646 PEPDP12955 493 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 ATP12AP54707 1039 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SNTA1Q13424 505 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 OSTF1Q92882 214 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SFXN2Q96NB2 322 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TGIF2Q9GZN2 237 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 RHBDL2Q9NX52 303 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM5Q9Y2B1 443 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 ARRDC5A6NEK1 342 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TTLL8A6PVC2 850 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 ACP2P11117 423 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SOX3P41225 446 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SRYQ05066 204 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CDC20Q12834 499 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 RGS21Q2M5E4 152 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 BCORP1Q8N888 145 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 AMBNQ9NP70 447 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 REV1Q9UBZ9 1251 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 M0R3H8 397 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 DDAH2O95865 285 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CBX7O95931 251 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CDK1P06493 297 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 BMP4P12644 408 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SLC15A1P46059 708 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 PSMD7P51665 324 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMPRSS3P57727 454 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SNRPNP63162 240 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TBCEQ15813 527 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 DGAT2L6Q6ZPD8 337 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 USP43Q70EL4 1123 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 COX15Q7KZN9 410 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 MARCH3Q86UD3 253 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR6Q1Q8NGQ2 317 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 C6orf62Q9GZU0 229 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 NMNAT1Q9HAN9 279 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CPNE5Q9HCH3 593 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CES1P1Q9UKY3 287 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 CLCA1A8K7I4 914 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 M0R129 80 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 RGS5O15539 181 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 FCMRO60667 390 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 KCNK2O95069 426 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 EPPINO95925 133 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 OPN1LWP04000 364 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TP53P04637 393 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 HNRNPCP07910 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 DBTP11182 482 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 OXA1LQ15070 435 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 PLAG1Q6DJT9 500 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 KLHL17Q6TDP4 642 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SIMC1Q8NDZ2 872 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR1J4Q8NGS1 313 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 NACC2Q96BF6 587 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF681Q96N22 645 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 STACQ99469 402 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SDF2Q99470 211 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 TSPAN10Q9H1Z9 355 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SACM1LQ9NTJ5 587 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SH3BGRL2Q9UJC5 107 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 ACAD8Q9UKU7 415 aa11.43□□□□□ -0.58
SYNGAP1-207ENST00000628646 SYT5O00445 386 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 MFN2O95140 757 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 AHCYP23526 432 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 F8A1P23610 371 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 KCNJ5P48544 419 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 LGALS3BPQ08380 585 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 INAQ16352 499 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 TMEM236Q5W0B7 351 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 P4HA3Q7Z4N8 544 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 BEST3Q8N1M1 668 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 OR2L13Q8N349 312 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 COX4I2Q96KJ9 171 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 IL4I1Q96RQ9 567 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ADAM30Q9UKF2 790 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZAR1LA6NP61 321 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 HMGN4O00479 90 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 RCBTB2O95199 551 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 GASTP01350 101 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 SEC23BQ15437 767 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ALKBH2Q6NS38 261 aa11.42□□□□□ -0.58
SYNGAP1-207ENST00000628646 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms