RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CEACAM19Q7Z692 300 aa11□□□□□ -0.65
TP53-227ENST00000622645 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 OR13C5Q8NGS8 318 aa11□□□□□ -0.65
TP53-227ENST00000622645 ABHD4Q8TB40 342 aa11□□□□□ -0.65
TP53-227ENST00000622645 ENKURQ8TC29 256 aa11□□□□□ -0.65
TP53-227ENST00000622645 SMAD5Q99717 465 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 CCDC86Q9H6F5 360 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 DDX28Q9NUL7 540 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 RPS6KB2Q9UBS0 482 aa11□□□□□ -0.65
TP53-227ENST00000622645 MRPS33Q9Y291 106 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 IER3IP1Q9Y5U9 82 aa11□□□□□ -0.65
TP53-227ENST00000622645 TTC36A6NLP5 189 aa11□□□□□ -0.65
TP53-227ENST00000622645 CLDN4O14493 209 aa11□□□□□ -0.65
TP53-227ENST00000622645 IMPA2O14732 288 aa11□□□□□ -0.65
TP53-227ENST00000622645 PRAMEF2O60811 474 aa11□□□□□ -0.65
TP53-227ENST00000622645 CSTAP01040 98 aa11□□□□□ -0.65
TP53-227ENST00000622645 F8A1P23610 371 aa11□□□□□ -0.65
TP53-227ENST00000622645 MYL9P24844 172 aa11□□□□□ -0.65
TP53-227ENST00000622645 MAOBP27338 520 aa11□□□□□ -0.65
TP53-227ENST00000622645 ATP12AP54707 1039 aa11□□□□□ -0.65
TP53-227ENST00000622645 TBRG1Q3YBR2 411 aa11□□□□□ -0.65
TP53-227ENST00000622645 BCORP1Q8N888 145 aa11□□□□□ -0.65
TP53-227ENST00000622645 GATSQ8NAP1 163 aa11□□□□□ -0.65
TP53-227ENST00000622645 ZNRF4Q8WWF5 429 aa11□□□□□ -0.65
TP53-227ENST00000622645 OR10A5Q9H207 317 aa11□□□□□ -0.65
TP53-227ENST00000622645 RNF121Q9H920 327 aa11□□□□□ -0.65
TP53-227ENST00000622645 INPP5EQ9NRR6 644 aa11□□□□□ -0.65
TP53-227ENST00000622645 EXTL2Q9UBQ6 330 aa11□□□□□ -0.65
TP53-227ENST00000622645 CHRNA9Q9UGM1 479 aa11□□□□□ -0.65
TP53-227ENST00000622645 NUFIP1Q9UHK0 495 aaKnown RBP11□□□□□ -0.65
TP53-227ENST00000622645 A0A0G2JMP0 313 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 A0A0X1KG70 313 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 A0A1W2PPK0 400 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 SOX30O94993 753 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 TFP02787 698 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 WNT1P04628 370 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 PSKH1P11801 424 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 CFL1P23528 166 aaKnown RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 NAA10P41227 235 aaPredicted RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 MAP2K3P46734 347 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 GFERP55789 205 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 TP53I3Q53FA7 332 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 ARHGAP11AQ6P4F7 1023 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 METAP1DQ6UB28 335 aaPredicted RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 ZNF550Q7Z398 422 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 GPALPP1Q8IXQ4 340 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 ZNF595Q8IYB9 648 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 OR4M2Q8NGB6 313 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 UBASH3BQ8TF42 649 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 GHSRQ92847 366 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 CLIP3Q96DZ5 547 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 PGLYRP3Q96LB9 341 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 FRMD6Q96NE9 622 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 BEX2Q9BXY8 128 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 BAIAP2Q9UQB8 552 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 MAU2Q9Y6X3 613 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 A0A1W2PRG6 482 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 PAHP00439 452 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 IFNGP01579 166 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 HLA-DQB1P01920 261 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 PROS1P07225 676 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 RPS5P46782 204 aaKnown RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 CAPZBP47756 277 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 IGLV3-21P80748 117 aaPredicted RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 HBMQ6B0K9 141 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 LMX1AQ8TE12 382 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 TCTN2Q96GX1 697 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 SLC38A3Q99624 504 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 TMEM43Q9BTV4 400 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 G6PC3Q9BUM1 346 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 MKKSQ9NPJ1 570 aaPredicted RBP10.99□□□□□ -0.65
TP53-227ENST00000622645 KLHL1Q9NR64 748 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 HAO2Q9NYQ3 351 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 SERTAD3Q9UJW9 196 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 RASD1Q9Y272 281 aa10.99□□□□□ -0.65
TP53-227ENST00000622645 IGHV5-51A0A0C4DH38 117 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 SERINC4A6NH21 518 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 HMX3A6NHT5 357 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 NDUFB2O95178 105 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 NSA2O95478 260 aaKnown RBP10.98□□□□□ -0.65
TP53-227ENST00000622645 THBS2P35442 1172 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 RPL4P36578 427 aaKnown RBP10.98□□□□□ -0.65
TP53-227ENST00000622645 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.98□□□□□ -0.65
TP53-227ENST00000622645 PLET1Q6UQ28 207 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 SYT9Q86SS6 491 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 OR51Q1Q8NH59 317 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 SGTBQ96EQ0 304 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 TGM7Q96PF1 710 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 NMNAT3Q96T66 252 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 SOHLH2Q9NX45 425 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 NLKQ9UBE8 527 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 PCDHGB7Q9Y5F8 929 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 HEATR5AQ86XA9 2040 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 A0A087WUJ7 227 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 A6NL46 340 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 LYRM1O43325 122 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 DDOSTP39656 456 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 SKP1P63208 163 aa10.98□□□□□ -0.65
TP53-227ENST00000622645 FUT7Q11130 342 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms